Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Updated HGNC download link (issue #506) #507

Open
wants to merge 2 commits into
base: dev
Choose a base branch
from
Open

Updated HGNC download link (issue #506) #507

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
2 commits
Select commit Hold shift + click to select a range
1845420
Update download link to "Complete HGNC approved dataset" file
mialaalv Oct 30, 2024
11a07c3
Update CHANGELOG.md
mialaalv Oct 30, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
1 change: 1 addition & 0 deletions CHANGELOG.md
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -15,6 +15,7 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0

- Updated modules and migrated non-specific modules to nf-core/modules [#484](https://github.com/nf-core/rnafusion/pull/484)
- Updated to nf-core/tools 3.0.2 [#504](https://github.com/nf-core/rnafusion/pull/504)
- Updated download link for HGNC dataset [#506](https://github.com/nf-core/rnafusion/issues/506)

### Fixed

Expand Down
2 changes: 1 addition & 1 deletion modules/local/hgnc/main.nf
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -18,7 +18,7 @@ process HGNC_DOWNLOAD {

script:
"""
wget https://ftp.ebi.ac.uk/pub/databases/genenames/hgnc/tsv/hgnc_complete_set.txt
wget https://storage.googleapis.com/public-download-files/hgnc/tsv/tsv/hgnc_complete_set.txt
date +%Y-%m-%d/%H:%M > HGNC-DB-timestamp.txt

cat <<-END_VERSIONS > versions.yml
Expand Down
Loading