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Update jax.config
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Updated singularity_cache_dir to point to flashscratch rather than fastscratch, due to the recent sumner2 update.
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alexis-catherine authored Oct 20, 2024
1 parent 6bfbf26 commit bd500fd
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion conf/jax.config
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@ params {
config_profile_description = 'The Jackson Laboratory Sumner HPC profile provided by nf-core/configs.'
config_profile_contact = 'Bill Flynn (@flynnb)'
config_profile_url = 'https://jacksonlaboratory.sharepoint.com/sites/ResearchIT/SitePages/Welcome-to-Sumner.aspx'
singularity_cache_dir = '/fastscratch/singularity_cache_nfcore'
singularity_cache_dir = '/flashscratch/singularity_cache_nfcore'
}

executor.$slurm.queueSize = 250
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