Merge pull request #135 from nextstrain/add-welsh-epitope-maps

Add Welsh et al. epitope sites and escape scores
nextstrain · Jan 27, 2024 · 61aed50 · 61aed50
2 parents 9cccaa9 + 9c619a2
commit 61aed50
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diff --git a/config/distance_maps/h3n2/ha/welsh_epitope_sites.json b/config/distance_maps/h3n2/ha/welsh_epitope_sites.json
@@ -0,0 +1,22 @@
+{
+  "name": "Welsh et al. epitope sites",
+  "default": 0,
+  "map": {
+    "HA1": {
+      "50": 1,
+      "82": 1,
+      "124": 1,
+      "135": 1,
+      "137": 1,
+      "143": 1,
+      "144": 1,
+      "145": 1,
+      "157": 1,
+      "159": 1,
+      "189": 1,
+      "193": 1,
+      "275": 1,
+      "276": 1
+    }
+  }
+}