Use centralized upload-to-s3

This workflow does not send messages to Slack, so use the --quiet option to disable the centralized script's default behavior of sending Slack messages.
nextstrain · Aug 10, 2023 · 9956d1f · 9956d1f
1 parent 1f682ac
commit 9956d1f
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diff --git a/ingest/bin/upload-to-s3 b/ingest/bin/upload-to-s3
diff --git a/ingest/workflow/snakemake_rules/upload.smk b/ingest/workflow/snakemake_rules/upload.smk
@@ -21,5 +21,5 @@ rule upload_to_s3:
         cloudfront_domain = config["upload"].get("s3", {}).get("cloudfront_domain", "")
     shell:
         """
-        ./bin/upload-to-s3 {input:q} {params.s3_dst:q}/{wildcards.remote_file_name:q} {params.cloudfront_domain}
+        ./vendored/upload-to-s3 --quiet {input:q} {params.s3_dst:q}/{wildcards.remote_file_name:q} {params.cloudfront_domain}
         """