Tangletree genotype colouring #1785
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This property will be used in upcoming work to show genotype colourings on both trees
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This particular method of loading a second tree is (I believe) rarely used and rarely developed -- see both the TODOs in the surrounding code and the (dev-only) redux immutability errors fixed in this commit. Still, we should support it!
In preparation for showing genotype colorings across multiple trees We don't (yet) consider root-sequences which are defined via sidecar files (i.e. not inline in the main JSON) We could improve memory efficiency if we compared the nuc/aa sequences for equality and used references to the main tree's root-sequence data, but as we're here only considering inlined root-sequences (i.e. small ones!) this implementation is simpler.
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genehack
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Includes some (overly!) strict conditionals. This functionality is particularly useful when comparing trees using the same (or very similar) sequences / sets of sequences to aid in understanding the different tree structures. Closes #1773
Oh how TypeScript would have helped! This bug was found while debugging the ability to show genotype colorings on both trees (added in the parent commit) where the visibility of the second tree was `undefined` upon loading, leading to `createVisibleLegendValues` not considering the second tree and thus removing legend items which were only observed in the second tree. Bug introduced ~4 years ago via 391bca4 although its effect was minor (and probably never noticed?)
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genehack
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Closes #1773