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Update to match neurodatascience/nipoppy:main #104

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merged 1 commit into from
Jul 11, 2024
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michellewang
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PR created/updated automatically by create-pull-request GitHub action. Will be merged automatically by automerge-action if there are no merge conflicts.

* fix doughnut path to be in correct directory

* do not update doughnut in BidsConversionWorkflow if simulate is True

* refactor PipelineConfig and PipelineStepConfig to add UPDATE_DOUGHNUT field for BIDS pipelines

* use Union instead of | in Pydantic annotation

* add comments for clarity

* remove unused property

* fix docs warnings
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PR approved by auto-approve-action GitHub action.

@michellewang michellewang merged commit d7c5620 into main Jul 11, 2024
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