add cryo-em to regression tests

nanome-ai · Sep 7, 2023 · 67fda6a · 67fda6a
1 parent 1bd05fb
commit 67fda6a
Showing 1 changed file with 27 additions and 0 deletions.
diff --git a/.github/workflows/regression-tests.yml b/.github/workflows/regression-tests.yml
@@ -168,4 +168,31 @@ jobs:
           docker run --rm \
           -v $(pwd)/nanome:/usr/local/lib/python3.8/site-packages/nanome \
           ${{ env.IMAGE_URI }} \
+          python -m unittest discover testsz
+
+  cryo-em-unittests:
+    runs-on: ubuntu-latest
+    env:
+      IMAGE_URI: public.ecr.aws/h7r1e4h2/cryo-em:latest
+    steps:
+      - uses: actions/checkout@v3
+      - name: Configure AWS credentials
+        uses: aws-actions/configure-aws-credentials@v1-node16
+        with:
+          aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }}
+          aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
+          aws-region: us-east-1
+      - name: Login to Amazon ECR Public
+        id: login-ecr-public
+        uses: aws-actions/amazon-ecr-login@v1
+        with:
+          registry-type: public
+      - name: Pull Latest image
+        run: |
+          docker pull ${{ env.IMAGE_URI }}
+      - name: Run tests with newest lib
+        run: |
+          docker run --rm \
+          -v $(pwd)/nanome:/opt/conda/lib/python3.9/site-packages/nanome \
+          ${{ env.IMAGE_URI }} \
           python -m unittest discover tests