Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

allow storeDir for RunBQSR #1001

Draft
wants to merge 3 commits into
base: master
Choose a base branch
from

fix overlapping file issue in AlignReads for outputs that share the s…

cfe13d7
Select commit
Loading
Failed to load commit list.
Draft

allow storeDir for RunBQSR #1001

fix overlapping file issue in AlignReads for outputs that share the s…
cfe13d7
Select commit
Loading
Failed to load commit list.
Travis CI / Travis CI - Branch succeeded Dec 31, 2023 in 9m 55s

Build Passed

The build passed, just like the previous build.

Details

This is a normal build for the hotfix/bqsr_storedir branch. You should be able to reproduce it by checking out the branch locally.

Jobs and Stages

This build only has a single job.
You can use jobs to test against multiple versions of your runtime or dependencies, or to speed up your build.

Build Configuration

Build Option Setting
Language Java
Operating System Linux (Xenial)
JDK Version openjdk8
Build Configuration
{
  "language": "java",
  "os": [
    "linux"
  ],
  "dist": "xenial",
  "sudo": true,
  "jdk": [
    "openjdk8"
  ],
  "services": [
    "docker"
  ],
  "before_install": [
    "export NXF_VER=19.10.0 && curl -fsSL get.nextflow.io | bash",
    "chmod 777 nextflow",
    "wget -O test-data.tar.gz --no-check-certificate 'https://docs.google.com/uc?export=download&id=10qEFp0KXY25hBdzykD-wHLFTMH--QloF'",
    "tar -xzvf test-data.tar.gz"
  ],
  "script": [
    "python3 tests/test_runner.py tests/tests.json"
  ]
}