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Modify generation of gene bed to ensure 0-based start site #124

Merged
merged 5 commits into from
Oct 10, 2024
Merged

Modify generation of gene bed to ensure 0-based start site #124

merged 5 commits into from
Oct 10, 2024

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pintoa1-mskcc
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@pintoa1-mskcc pintoa1-mskcc commented Sep 13, 2024 •
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PR checklist

  • Change gene bed from 1 based gff to 0-based gff, metafusion expects 0 based file, however gff's are 1 based.
  • Ensure the test suite passes (nextflow run . -profile test,docker --outdir <OUTDIR>).

@anoronh4 anoronh4 mentioned this pull request Sep 17, 2024
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@pintoa1-mskcc pintoa1-mskcc reopened this Oct 10, 2024
@pintoa1-mskcc pintoa1-mskcc reopened this Oct 10, 2024
@pintoa1-mskcc pintoa1-mskcc merged commit dce1712 into develop Oct 10, 2024
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