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Fixed sample mapping output generator for argos operator 1.1.3 #918

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merged 1 commit into from
Aug 19, 2021

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allanbolipata
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R2 pooled normals were being duplicated in mapping files; removed conflicting code.

Also adjusted tumor sample bam mapping string generator - it had normal_sample_name in there.

@allanbolipata allanbolipata changed the title Fixed sample mapping output generator for argos 1.1.3 Fixed sample mapping output generator for argos operator 1.1.3 Aug 18, 2021
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Solves #917

@allanbolipata allanbolipata merged commit 497ddfd into develop Aug 19, 2021
@allanbolipata allanbolipata deleted the bugfix/argos_operator branch August 19, 2021 19:27
@sivkovic sivkovic mentioned this pull request Aug 19, 2021
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2 participants