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maehrlab

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  1. pharyngeal_endoderm_development pharyngeal_endoderm_development Public

    Jupyter Notebook 7 2

  2. thymusatlastools thymusatlastools Public

    R package to accompany our recent Immunity paper on the mouse thymus developmental cell atlas.

    R 5 1

  3. thymusatlasanalysis thymusatlasanalysis Public

    Analysis for our 2018 Immunity paper (cell atlas of mouse thymus development).

    R 3 1

  4. thymusatlastools2 thymusatlastools2 Public

    A set of general purpose tools for single cell analysis. Upgrade of thymusatlastools, also available on our Github.

    R 3

  5. seurat seurat Public

    Forked from satijalab/seurat

    R toolkit for single cell genomics

    R 1 1

  6. ggbio ggbio Public

    Forked from lawremi/ggbio

    Grid and ggplot2 based visualization for biological data

    R 1

Repositories

Showing 10 of 11 repositories
  • epigenetic_characterization_hPFEv1 Public
    maehrlab/epigenetic_characterization_hPFEv1’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Aug 17, 2023
  • cellmatch Public
    maehrlab/cellmatch’s past year of commit activity
    R 0 GPL-3.0 0 0 0 Updated Aug 1, 2023
  • de_screen_analysis Public

    Code to reproduce our analyses from the definitive endoderm screen, April 2019 Cell Reports

    maehrlab/de_screen_analysis’s past year of commit activity
    Python 1 1 0 0 Updated Feb 7, 2022
  • pharyngeal_endoderm_development Public
    maehrlab/pharyngeal_endoderm_development’s past year of commit activity
    Jupyter Notebook 7 2 0 0 Updated Jan 27, 2022
  • thymusatlastools2 Public

    A set of general purpose tools for single cell analysis. Upgrade of thymusatlastools, also available on our Github.

    maehrlab/thymusatlastools2’s past year of commit activity
    R 3 0 0 0 Updated Jan 6, 2022
  • thymusatlasanalysis Public

    Analysis for our 2018 Immunity paper (cell atlas of mouse thymus development).

    maehrlab/thymusatlasanalysis’s past year of commit activity
    R 3 1 1 0 Updated Dec 12, 2019
  • de_screen_atacTFAP Public

    Implementation of the atacTFAP analysis in our DE screen paper (April 2018 Cell Reports)

    maehrlab/de_screen_atacTFAP’s past year of commit activity
    R 0 0 0 0 Updated Apr 23, 2019
  • bubblegrid Public

    Bubble grid plots for single-cell omics data

    maehrlab/bubblegrid’s past year of commit activity
    R 0 0 0 0 Updated Feb 7, 2019
  • ggbio Public Forked from lawremi/ggbio

    Grid and ggplot2 based visualization for biological data

    maehrlab/ggbio’s past year of commit activity
    R 1 24 0 0 Updated Oct 12, 2018
  • seurat Public Forked from satijalab/seurat

    R toolkit for single cell genomics

    maehrlab/seurat’s past year of commit activity
    R 1 GPL-3.0 923 0 0 Updated Sep 27, 2018
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