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1. iqbal-lab-org/pandora iqbal-lab-org/pandora Public

   Pan-genome inference and genotyping with long noisy or short accurate reads

   C++ 110 14

2. iqbal-lab-org/make_prg iqbal-lab-org/make_prg Public

   Code to create a PRG from a Multiple Sequence Alignment file

   Python 22 7

3. karel-brinda/Phylign karel-brinda/Phylign Public

   Alignment against all pre-2019 bacteria on laptops within a few hours (former MOF-Search)

   Python 25 5

4. iqbal-lab-org/cobs iqbal-lab-org/cobs Public

   Forked from bingmann/cobs

   COBS - Compact Bit-Sliced Signature Index (for Genomic k-Mer Data or q-Grams)

   C++ 16 2

5. dbgwas dbgwas Public

   Github (trivial) mirror for https://gitlab.com/leoisl/dbgwas

   1

6. plasnet plasnet Public

   Clustering, visualising and exploring plasmid networks

   JavaScript 3 2