minor #175

	name: Continuous integration

	on: [push, pull_request]

	jobs:
	build_and_test:
	runs-on: ubuntu-latest
	steps:
	- uses: actions/checkout@v3

	- uses: actions-rs/toolchain@v1
	with:
	profile: minimal
	toolchain: stable
	override: true

	- name: Cache rust build
	uses: Swatinem/rust-cache@v2

	- name: Install dependency
	run: \|
	pip install --user --upgrade pip
	pip install --user Pygments sphinx==8.* pandoc nbsphinx \
	sphinx-autodoc-typehints sphinx_rtd_theme \
	markupsafe

	- name: Build and test package
	run: \|
	cd ${GITHUB_WORKSPACE}/anndata-hdf5 && cargo test --no-fail-fast
	cd ${GITHUB_WORKSPACE}/anndata && cargo test --no-fail-fast
	cd ${GITHUB_WORKSPACE}/anndata-test-utils && cargo test --no-fail-fast
	cd ${GITHUB_WORKSPACE}/python && pip install --user .[test]
	pytest -v --durations=0 ${GITHUB_WORKSPACE}/python/tests

	- name: benchmark
	run: \|
	cd ${GITHUB_WORKSPACE}/anndata-test-utils && cargo bench
	cd ${GITHUB_WORKSPACE}

	- uses: actions/upload-artifact@v4
	with:
	name: benchmark
	path: target/criterion

	- name: Build doc
	run: \|
	cd ${GITHUB_WORKSPACE}
	sphinx-build ${GITHUB_WORKSPACE}/python/docs _build/html

	- name: Upload doc
	uses: actions/upload-artifact@v4
	with:
	name: documentation
	path: ./_build/html

	upload_gh-page:
	name: Publish
	runs-on: ubuntu-latest
	needs: [build_and_test]
	steps:
	- name: Download
	uses: actions/download-artifact@v3

	- name: Upload doc
	uses: peaceiris/actions-gh-pages@v3
	if: ${{ github.ref == 'refs/heads/main' }}
	with:
	github_token: ${{ secrets.GITHUB_TOKEN }}
	publish_dir: ./documentation
	publish_branch: gh-pages
	force_orphan: true

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