-
Notifications
You must be signed in to change notification settings - Fork 20
Home
sergio contrino edited this page Aug 22, 2019
·
1 revision
a quick summary of commands relating to the tutorial in the documentation
clone and set project file
git clone https://github.com/intermine/biotestmine
cd biotestmine/
cp data/project.xml .
sed -i 's/\DATA\_DIR/\/your\/path\/to\/data/g' project.xml
Edit your properties file and create the required databases.
see doc
install and prepare solr
in a directory of your choice:
wget http://archive.apache.org/dist/lucene/solr/7.2.1/solr-7.2.1.zip
unzip solr-7.2.1.zip
cd solr-7.2.1
./bin/solr start
./bin/solr create -c biotestmine-search
./bin/solr create -c biotestmine-autocomplete
Build the mine
in the biotestmine directory:
./gradlew buildDB
wget https://raw.githubusercontent.com/intermine/intermine-scripts/master/project_build
chmod +x project_build
./project_build -b -v localhost ~/biotestmine-dump