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  1. scGAN scGAN Public

    Realistic in silico generation and augmentation of single cell RNA-seq data using Generative Adversarial Neural Networks

    Python 77 25

  2. MAXOMOD_Pipeline MAXOMOD_Pipeline Public

    Reproducible analysis pipeline for the MAXOMOD project: Multiomic ALS signatures highlight sex differences and molecular subclusters and identify the MAPK pathway as therapeutic target

    R 7 4

  3. epigenetic-neural-glioblastoma epigenetic-neural-glioblastoma Public

    Jupyter Notebook 5

  4. dcsurv dcsurv Public

    Discrete Calibrated Survival

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  5. ecarenet ecarenet Public

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  6. discern discern Public

    Deep Single Cell Expression ReconstructioN for improved cell clustering and cell subtype and state detection

    Jupyter Notebook 3 3

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  • Seumetry Public

    R Toolkit for Flow- and Mass Cytometry

    imsb-uke/Seumetry’s past year of commit activity
    HTML 2 MIT 0 0 0 Updated Oct 7, 2024
  • nichepca Public
    imsb-uke/nichepca’s past year of commit activity
    Python 1 MIT 1 1 0 Updated Oct 4, 2024
  • DISSECT Public

    Deep semi-supervised complete cell deconvolution https://imsb-uke.github.io/DISSECT/

    imsb-uke/DISSECT’s past year of commit activity
    Jupyter Notebook 3 MIT 0 1 0 Updated Sep 27, 2024
  • MAXOMOD_Pipeline Public

    Reproducible analysis pipeline for the MAXOMOD project: Multiomic ALS signatures highlight sex differences and molecular subclusters and identify the MAPK pathway as therapeutic target

    imsb-uke/MAXOMOD_Pipeline’s past year of commit activity
    R 7 MIT 4 0 0 Updated Sep 26, 2024
  • ANCA-GN_transcriptomics Public

    Contains code to analyse the data from the paper: Immune profiling-based targeting of pathogenic T cells with ustekinumab in ANCA-associated glomerulonephritis

    imsb-uke/ANCA-GN_transcriptomics’s past year of commit activity
    Jupyter Notebook 1 MIT 0 0 0 Updated Sep 21, 2024
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    Jupyter Notebook 0 0 0 0 Updated Aug 3, 2024
  • imsb-uke/epigenetic-neural-glioblastoma’s past year of commit activity
    Jupyter Notebook 5 MIT 0 0 0 Updated Jul 10, 2024
  • pcai Public
    imsb-uke/pcai’s past year of commit activity
    Jupyter Notebook 3 GPL-3.0 0 0 0 Updated Jul 1, 2024
  • scGAN Public

    Realistic in silico generation and augmentation of single cell RNA-seq data using Generative Adversarial Neural Networks

    imsb-uke/scGAN’s past year of commit activity
    Python 77 MIT 25 0 0 Updated May 27, 2024
  • discern Public

    Deep Single Cell Expression ReconstructioN for improved cell clustering and cell subtype and state detection

    imsb-uke/discern’s past year of commit activity
    Jupyter Notebook 3 MIT 3 0 0 Updated Feb 7, 2024

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