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1. WayScience/phenotypic_profiling WayScience/phenotypic_profiling Public

   Machine learning for predicting 15 single-cell phenotypes from cell morphology profiles

   Jupyter Notebook 2 3

2. WayScience/pyroptosis_signature_image_profiling WayScience/pyroptosis_signature_image_profiling Public

   This repository contains the pipelines used to analyze the data sets from the Interstellar collaboration.

   Jupyter Notebook 2 3

3. cytomining/pycytominer cytomining/pycytominer Public

   Python package for processing image-based profiling data

   Python 80 36

4. cytomining/CytoTable cytomining/CytoTable Public

   Transform CellProfiler and DeepProfiler data for processing image-based profiling readouts with Pycytominer and other Cytomining tools.

   Python 7 5

5. broadinstitute/lincs-cell-painting broadinstitute/lincs-cell-painting Public

   Processed Cell Painting Data for the LINCS Drug Repurposing Project

   Jupyter Notebook 25 13

6. broadinstitute/cell-health broadinstitute/cell-health Public

   Predicting Cell Health with Morphological Profiles

   HTML 35 8