Merge branch 'trunk-patch' into trunk-minor

.pre-commit-config.yaml

@@ -25,7 +25,7 @@ repos:
     language: pygrep
     types_or: [python, c, c++, cuda, inc]
 - repo: https://github.com/pre-commit/pre-commit-hooks
-  rev: 'v4.1.0'
+  rev: 'v4.3.0'
   hooks:
   - id: end-of-file-fixer
     exclude_types: [svg]
@@ -91,7 +91,7 @@ repos:
         ^hoomd/metal/
       )
 - repo: https://github.com/pre-commit/mirrors-clang-format
-  rev: v13.0.1
+  rev: v14.0.6
   hooks:
   - id: clang-format
     types_or: [c, c++, cuda, inc]

hoomd/hpmc/UpdaterBoxMC.cc

@@ -405,7 +405,9 @@ void UpdaterBoxMC::update(uint64_t timestep)
 
     if (is_oversheared())
         {
-        while (remove_overshear()) { }; // lattice reduction, possibly in several steps
+        while (remove_overshear())
+            {
+            }; // lattice reduction, possibly in several steps
         m_exec_conf->msg->notice(5)
             << "Lattice reduction performed at step " << timestep << std::endl;
         }

hoomd/hpmc/integrate.py

@@ -252,11 +252,6 @@
 path. This inerts depletant particles during every trial move and modifies the
 acceptance criterion accordingly. See `Glaser 2015
 <https://dx.doi.org/10.1063/1.4935175>`_ for details.
-
-Warning:
-    The algorithm and API for implicit depletants is **experimental** and will
-    change in a future minor releases. Specifically, it will switch to accepting
-    a single type parameter: ``fugacity['A', 'A']`` -> ``fugacity['A']``
 """
 
 from hoomd import _hoomd
@@ -324,17 +319,11 @@ class HPMCIntegrator(Integrator):
 
         depletant_fugacity (`TypeParameter` [ ``particle type``, `float`]):
             Depletant fugacity
-            :math:`[\\mathrm{volume}^{-1}]` (**default:** ``0``)
+            :math:`[\\mathrm{volume}^{-1}]` (**default:** 0)
 
             Allows setting the fugacity per particle type, e.g. ``'A'``
             refers to a depletant of type **A**.
 
-            Warning:
-                The algorithm and API for implicit depletants is
-                **experimental** and will change in a future minor releases.
-                Specifically, it will switch to accepting a single type
-                parameter: ``fugacity['A', 'A']`` -> ``fugacity['A']``
-
         depletant_ntrial (`TypeParameter` [``particle type``, `int`]):
             Multiplicative factor for the number of times a depletant is
             inserted. This factor is accounted for in the acceptance criterion

hoomd/hpmc/update.py

@@ -418,6 +418,9 @@ class MuVT(Updater):
           (applies to Gibbs ensemble)
         ntrial (float): (**default**: 1) Number of configurational bias attempts
           to swap depletants
+        fugacity (`TypeParameter` [ ``particle type``, `float`]):
+            Particle fugacity
+            :math:`[\mathrm{volume}^{-1}]` (**default:** 0).
     """
 
     def __init__(self,