Skip to content

Commit

Permalink
Switching PROOF link to the how-to document rather than the tool itself
Browse files Browse the repository at this point in the history
  • Loading branch information
tefirman committed Mar 13, 2024
1 parent 786c097 commit 489ccdf
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion README.md
Original file line number Diff line number Diff line change
Expand Up @@ -6,7 +6,7 @@ This WILDS WDL workflow converts a WGS FASTQ file into an unmapped CRAM file. Wh

## Usage

For Fred Hutch users that are new to WDL, we recommend using [PROOF](https://proof.fredhutch.org/) to submit this workflow directly to the on-premise HPC cluster, as it simplifies interaction with Cromwell and provides a user-friendly front-end for job submission and tracking. For users outside of Fred Hutch or more advanced users who who would like to run the workflow locally, command line execution is relatively simple:
For Fred Hutch users that are new to WDL, we recommend using [PROOF](https://sciwiki.fredhutch.org/dasldemos/proof-how-to/) to submit this workflow directly to the on-premise HPC cluster, as it simplifies interaction with Cromwell and provides a user-friendly front-end for job submission and tracking. For users outside of Fred Hutch or more advanced users who who would like to run the workflow locally, command line execution is relatively simple:
```
java -jar cromwell-86.jar run fastq-to-cram.wdl \
--inputs fastq-to-cram-inputs.json \
Expand Down

0 comments on commit 489ccdf

Please sign in to comment.