Ambiguous relation for "is_small_mol_activator"

[dustine32]

In this GO-CAM (DLG4 Alliance), there is an edge (circled) that's not in the legend so it's unclear what the edge means:

Looking in the Editor, I can see this edge relation is "is small molecule activator of":

Note: "is_small_mol_activator" is NOT a descendant of positively_regulates in RO

[dustine32]

Reported by Paul Sternberg. Commented on by @thomaspd.

Tagging @tmushayahama @kltm @vanaukenk @cmungall @pkalita-lbl

[kltm]

@pgaudet This was brought up in email; assigned to the "Alliance" project for the moment, but there may be a better home for it.

[dustine32]

From @thomaspd on a 2024-03-04 call: Query production models for all used relations (or causal relations only?) and ensure the pathway widget knows how to render them correctly.

[vanaukenk]

See #50

[vanaukenk]

'is small molecule activator of' display the same line, color, and symbol as direct positive regulation
'is small molecule inhibitor of' display the same line, color, and symbol as direct negative regulation

Don't display the 'has small molecule activator' or 'has small molecule inhibitor' relations - these models will need to be flagged and updated.

Spreadsheet

[vanaukenk]

Tested on noctua-dev and appears to be working okay with the new symbols and legends.