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Issue 2392 gorule 0000065 implement rule #2403

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merged 2 commits into from
Dec 23, 2024
Merged

Issue 2392 gorule 0000065 implement rule #2403

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fc050fe
For #2392, geneontology/pipeline#408
mugitty Dec 16, 2024
3e52864
refreshing rules README.md file
mugitty Dec 16, 2024
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2 changes: 1 addition & 1 deletion metadata/rules/README.md
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Expand Up @@ -1094,7 +1094,7 @@ If an annotation has GO_REF:0000118 (GAF column 6, GPAD column 5) and the taxon
## Annotations to term that are candidates for obsoletion should be removed

* id: [GORULE:0000065](https://github.com/geneontology/go-site/blob/master/metadata/rules/gorule-0000065.md)
* status: approved
* status: implemented


Terms scheduled for obsoletion are identified by the subset gocheck_obsoletion_candidate.
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2 changes: 1 addition & 1 deletion metadata/rules/gorule-0000065.md
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Expand Up @@ -4,7 +4,7 @@ id: GORULE:0000065
title: "Annotations to term that are candidates for obsoletion should be removed"
type: report
fail_mode: soft
status: approved
status: implemented
contact: "[email protected]"
implementations:
- language: python
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2 changes: 1 addition & 1 deletion pipeline/requirements.txt
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@@ -1,5 +1,5 @@
PyYAML
ontobio==2.9.11
ontobio==2.9.12
click
pyparsing==2.4.7
antlr4-python3-runtime==4.9.3
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