add env.yaml

.github/workflows/test.yml

@@ -23,32 +23,23 @@ jobs:
         python-version: [3.11]
 
     steps:
-      - uses: actions/checkout@v2
+      - uses: actions/checkout@v4
+        with:
+          submodules: true
 
-      - uses: conda-incubator/setup-miniconda@v2
+      - uses: mamba-org/setup-micromamba@v1
         with:
-          auto-update-conda: true
-          python-version: ${{ matrix.python-version }}
-          channels: conda-forge
-          channel-priority: true
+          micromamba-version: latest
+          environment-file: environment.yml
 
       - name: Show conda installation info
         run: |
           conda info
           conda list
 
-      - name: Install requirements
-        run: |
-          conda install mamba
-          mamba install --file=requirements-build.txt --file=requirements-library.txt
-          mamba list
-
       - name: Build and install package
         run: |
-          pip install -e .
-
-      - name: Install testing dependencies
-        run: mamba install --file=requirements-testing.txt
+          pip install --no-build-isolation --editable .
 
       - name: Test import
         run: |
@@ -59,5 +50,4 @@ jobs:
         run: |
           pwd
           ls
-          mamba install pytest
           bmi-test pymt_dbseabed.bmi:DbSeabedData --config-file=${{github.workspace}}/notebooks/config_file.yaml --root-dir=${{github.workspace}}/notebooks -vvv

environment.yml

@@ -0,0 +1,12 @@
+# An env for ci testing
+name: testing
+channels:
+  - conda-forge
+dependencies:
+  - python =3
+  - pip
+  - bmipy
+  - numpy
+  - bmi-tester >=0.5.5
+  - bmi_dbseabed
+  - pymt >=1.3