[auto] Update dependencies in poetry.lock

[tcompa]

Updated dependencies:

Updating dependencies
Resolving dependencies...

Package operations: 0 installs, 1 update, 0 removals

  - Updating cloudpickle (3.0.0 -> 3.1.0)

Writing lock file

Outdated dependencies before PR:

alabaster                                      (!) 0.7.16             
anyio                                          (!) 4.6.0              
astropy                                        (!) 6.0.1              
astropy-iers-data                              (!) 0.2024.10.7.0.32.46
cellpose                                       (!) 2.2.3              
charset-normalizer                             (!) 3.3.2              
cloudpickle                                        3.0.0              
dask                                               2024.8.0           
debugpy                                        (!) 1.8.6              
docstring-parser                                   0.15               
executing                                      (!) 0.10.0             
filelock                                           3.13.4             
imageio                                        (!) 2.35.1             
imageio-ffmpeg                                 (!) 0.4.9              
ipython                                        (!) 8.18.1             
jsonschema-specifications                      (!) 2023.12.1          
lxml                                               4.9.4              
markupsafe                                     (!) 3.0.0              
napari-segment-blobs-and-things-with-membranes (!) 0.3.8              
napari-skimage-regionprops                     (!) 0.8.2              
napari-tools-menu                              (!) 0.1.19             
networkx                                       (!) 3.2.1              
numcodecs                                          0.12.1             
numpy                                              1.26.4             
nvidia-cublas-cu12                             (!) 12.1.3.1           
nvidia-cuda-cupti-cu12                         (!) 12.1.105           
nvidia-cuda-nvrtc-cu12                         (!) 12.1.105           
nvidia-cuda-runtime-cu12                       (!) 12.1.105           
nvidia-cudnn-cu12                              (!) 9.1.0.70           
nvidia-cufft-cu12                              (!) 11.0.2.54          
nvidia-curand-cu12                             (!) 10.3.2.106         
nvidia-cusolver-cu12                           (!) 11.4.5.107         
nvidia-cusparse-cu12                           (!) 12.1.0.106         
nvidia-nccl-cu12                               (!) 2.20.5             
nvidia-nvtx-cu12                               (!) 12.1.105           
pooch                                          (!) 1.8.0              
pydantic                                           2.8.2              
pydantic-core                                      2.20.1             
pyparsing                                      (!) 3.1.4              
pytest                                         (!) 7.4.4              
scipy                                              1.13.1             
sphinx                                         (!) 7.4.7              
stack-data                                     (!) 0.5.1              
stackview                                      (!) 0.8.2              
tifffile                                       (!) 2024.8.30          
tomli-w                                        (!) 1.0.0              
triton                                         (!) 3.0.0              
zarr                                               2.18.2             

Outdated dependencies after PR:

alabaster                                      (!) 0.7.16     1.0.0    
astropy                                        (!) 6.0.1      6.1.4    
cellpose                                       (!) 2.2.3      3.0.11   
dask                                               2024.8.0   2024.9.1 
docstring-parser                                   0.15       0.16     
executing                                      (!) 0.10.0     2.1.0    
filelock                                           3.13.4     3.16.1   
imageio-ffmpeg                                 (!) 0.4.9      0.5.1    
ipython                                        (!) 8.18.1     8.28.0   
lxml                                               4.9.4      5.3.0    
napari-segment-blobs-and-things-with-membranes (!) 0.3.8      0.3.11   
napari-skimage-regionprops                     (!) 0.8.2      0.10.1   
networkx                                       (!) 3.2.1      3.4.1    
numcodecs                                          0.12.1     0.13.1   
numpy                                              1.26.4     2.1.2    
nvidia-cublas-cu12                             (!) 12.1.3.1   12.6.3.3 
nvidia-cuda-cupti-cu12                         (!) 12.1.105   12.6.80  
nvidia-cuda-nvrtc-cu12                         (!) 12.1.105   12.6.77  
nvidia-cuda-runtime-cu12                       (!) 12.1.105   12.6.77  
nvidia-cudnn-cu12                              (!) 9.1.0.70   9.5.0.50 
nvidia-cufft-cu12                              (!) 11.0.2.54  11.3.0.4 
nvidia-curand-cu12                             (!) 10.3.2.106 10.3.7.77
nvidia-cusolver-cu12                           (!) 11.4.5.107 11.7.1.2 
nvidia-cusparse-cu12                           (!) 12.1.0.106 12.5.4.2 
nvidia-nccl-cu12                               (!) 2.20.5     2.23.4   
nvidia-nvtx-cu12                               (!) 12.1.105   12.6.77  
pooch                                          (!) 1.8.0      1.8.2    
pydantic                                           2.8.2      2.9.2    
pydantic-core                                      2.20.1     2.24.1   
pytest                                         (!) 7.4.4      8.3.3    
scipy                                              1.13.1     1.14.1   
sphinx                                         (!) 7.4.7      8.1.3    
stack-data                                     (!) 0.5.1      0.6.3    
stackview                                      (!) 0.8.2      0.11.2   
tifffile                                       (!) 2024.8.30  2024.9.20
triton                                         (!) 3.0.0      3.1.0    
zarr                                               2.18.2     2.18.3   

Note: there may be dependencies in the table above which were not updated as part of this PR.
The reason is they require manual updating due to the way they are pinned.

[github-actions]

Coverage report

Click to see where and how coverage changed

File	Statements	Missing	Coverage	Coverage (new stmts)	Lines missing
fractal_tasks_core
channels.py
utils.py
fractal_tasks_core/ngff
specs.py
fractal_tasks_core/roi
v1_checks.py
fractal_tasks_core/tables
v1.py
fractal_tasks_core/tasks
_utils.py
_zarr_utils.py
apply_registration_to_image.py
calculate_registration_image_based.py
cellpose_segmentation.py
cellpose_utils.py
cellvoyager_to_ome_zarr_compute.py
cellvoyager_to_ome_zarr_init.py
cellvoyager_to_ome_zarr_init_multiplex.py
copy_ome_zarr_hcs_plate.py
find_registration_consensus.py
illumination_correction.py
image_based_registration_hcs_init.py
import_ome_zarr.py
init_group_by_well_for_multiplexing.py
io_models.py
napari_workflows_wrapper.py
projection.py
projection_utils.py
Project Total

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