Use NULL
for onset-to-event and risk function arguments
#148
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
This PR addresses #147 by replacing the use of
NA
withNULL
for turning off onset-to-event delays (e.g.onset_to_hosp
oronset_to_death
) or risks (e.g.hosp_risk
orhosp_death_risk
).The default value for
onset_to_recovery
has been changed fromNA
toNULL
insim_linelist()
andsim_outbreak()
. The documentation of function argument has been updated, as has the unit tests and a vignette.Internal checking functions have been updated to check for
NULL
values. Theas_function()
convertsNULL
to the sameNA
generating function, therefore the output line list still contains a column ofNA
s which theses processes are turned off.