v1.2.0

Changed

• Streamlined and simplified the report.
• The per-read stats TSV file is no longer created by default. Instead, several histogram TSV files of read / alignment statistics (read length and mean quality; alignment accuracy and coverage) are output. The original per-read TSV can still be created with the --per_read_stats parameter. It is now gzip-compressed.

Added

• IGV config JSON file to the outputs (in order to visualise the alignments and called variants).