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v0.16.0

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@epi2melabs-bot epi2melabs-bot released this 04 Mar 22:12
· 50 commits to master since this release

Added

  • Support for reading SAM tags from FASTQ headers.

Changed

  • fastcat will output a tab between the Read ID and the SAM tags rather than a space to match samtools convention.
  • bamstats uses bam_get_tag_caseinsensitive wrapper to get SAM tags with case insensitivity.
  • fastcat and bamstats will infer a Run ID from the RG tag if RD is not available.
  • Bumped version of htslib used to 1.19.

Fixed

  • Incorrectly capitalised ONT SAM tags are now output in lowercase by fastcat: ch, rn, st.