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586 Open 918 Closed
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Issues list

Arrows overlap atoms of chemical elements after save/load to/from RDF or layout actions Bug Cascade reactions MMPK Scope for Pathway reactions, View-only mode, Static images, Custom buttons and Ketcher API changes Priority: Medium
#2586 opened Oct 25, 2024 by ivanmaslow Indigo-1.26.0-rc.1 (Current)
@even1024
The ordering of reactions is changed after Undo/Redo of adding from file and Layout or Save/Load actions to/from RDF Bug Cascade reactions MMPK Scope for Pathway reactions, View-only mode, Static images, Custom buttons and Ketcher API changes Priority: High
#2585 opened Oct 25, 2024 by ivanmaslow Indigo-1.26.0-rc.1 (Current)
@even1024
The ordering of several separate reactions is changed after layout and save/load to/from RDF actions Bug Cascade reactions MMPK Scope for Pathway reactions, View-only mode, Static images, Custom buttons and Ketcher API changes Priority: High
#2584 opened Oct 25, 2024 by ivanmaslow Indigo-1.26.0-rc.1 (Current)
@even1024
Not correct length of Multi-Tailed and Single arrows for reactions with atoms after loading from RDF or Layout actions Bug Cascade reactions MMPK Scope for Pathway reactions, View-only mode, Static images, Custom buttons and Ketcher API changes Priority: High
#2583 opened Oct 25, 2024 by ivanmaslow Indigo-1.26.0-rc.1 (Current)
@even1024
1
Atoms losts their valence value on export to CDXML Bug Export to CDXML Bucket: Bugs related to Export to CDXML Priority: High regression
#2582 opened Oct 25, 2024 by AlexeyGirin Indigo-1.25.0-rc.5
1
Saving atom to monomer connections to Mol and HELM
#2575 opened Oct 24, 2024 by ljubica-milovic
Support for Collapsed monomers
#2574 opened Oct 24, 2024 by ljubica-milovic
Error on connection to opensearch instance with indigo Bingo-Elastic
#2562 opened Oct 17, 2024 by MysterionRise
@MysterionRise
Read Name and Reaction Conditions from RDF Metadata as a text MMPK Scope for Pathway reactions, View-only mode, Static images, Custom buttons and Ketcher API changes
#2559 opened Oct 16, 2024 by yauhen-karmyzau Indigo-1.26.0-rc.1 (Current)
@even1024
Reaction Auto-Mapping Tool doesn't work for single and cascade reactions with Multi-Tailed Arrow Bug Cascade reactions MMPK Scope for Pathway reactions, View-only mode, Static images, Custom buttons and Ketcher API changes Priority: High
#2556 opened Oct 15, 2024 by ivanmaslow Indigo-1.26.0-rc.1 (Current)
@even1024
"Calculate Properties" for macromolecules
#2552 opened Oct 14, 2024 by ljubica-milovic
Can't correctly save specific cascade reaction with 3 tails to RXN/RDF Bug Cascade reactions MMPK Scope for Pathway reactions, View-only mode, Static images, Custom buttons and Ketcher API changes Priority: High
#2551 opened Oct 11, 2024 by ivanmaslow Indigo-1.26.0-rc.1 (Current)
If reagents are on Canvas for cascade reaction, it can't be correctly saved to RXN/RDF Bug Cascade reactions MMPK Scope for Pathway reactions, View-only mode, Static images, Custom buttons and Ketcher API changes Priority: High
#2550 opened Oct 11, 2024 by ivanmaslow Indigo-1.26.0-rc.1 (Current)
bug for bingo-elastic substructure search
#2544 opened Oct 10, 2024 by jank9201
2
Export of unknown monomer to HELM doesn't work Bug HELM Bucket: Bugs related to Export to HELM format Priority: Medium
#2539 opened Oct 9, 2024 by AlexeyGirin Indigo-1.26.0-rc.1 (Current)
Distorted structure representation when opening saved macromolecules in micro mode in CML, CDX, CDXML, Base 64 CDX formats CML Bucket: CML format related issues Export to CDX Bucket: Bugs related to Export to CDX Export to CDXML Bucket: Bugs related to Export to CDXML Macro-Micro Bucket: Switching between Micro and Macro modes Priority: High
#2523 opened Oct 7, 2024 by Zhirnoff Indigo-1.25.0-rc.5
The length of arrow should be 1 bond after importing reaction from rxn file Bug Priority: Medium Team G
#2520 opened Oct 7, 2024 by AnnaKosol Indigo-1.26.0-rc.1 (Current)
1
The length of the arrow becomes 2 bonds after layout but should be 1 Bug Layout Priority: Medium Team G
#2519 opened Oct 7, 2024 by AnnaKosol Indigo-1.26.0-rc.1 (Current)
1
1
Elliptical arrows can not be saved to the png Bug Priority: High SVG/PNG Bucket: Bugs related to SVG/PNG export Team G
#2513 opened Oct 7, 2024 by AnnaKosol Indigo-1.26.0-rc.1 (Current)
1
Several cascade reactions are not aligned after layout or save/load to/from RDF actions Bug Cascade reactions MMPK Scope for Pathway reactions, View-only mode, Static images, Custom buttons and Ketcher API changes Priority: Low
#2498 opened Oct 4, 2024 by ivanmaslow Indigo-1.26.0-rc.1 (Current)
Test fail on compare CML file for R-group Bug CML Bucket: CML format related issues Priority: High regression
#2497 opened Oct 4, 2024 by Zhirnoff Indigo-1.25.0-rc.5
@rrodionov91
2
Not the first reaction on Canvas is saved to RXN when there are several reactions with single and Multi-Tailed Arrows Bug Cascade reactions Export to RXN Bucket: Export to RXN related issues MMPK Scope for Pathway reactions, View-only mode, Static images, Custom buttons and Ketcher API changes Priority: High
#2482 opened Oct 3, 2024 by ivanmaslow Indigo-1.26.0-rc.1 (Current)
@even1024
Support for three letter sequences Export to Sequence Bucket: Bugs related to Export to Sequence mode
#2472 opened Oct 3, 2024 by ljubica-milovic Indigo-1.26.0-rc.1 (Current)
@AliaksandrDziarkach
The reaction with any bond or other aromatic bond is incorrect when saved to png (H isn't displayed) Bug Priority: Medium SVG/PNG Bucket: Bugs related to SVG/PNG export
#2467 opened Oct 2, 2024 by AnnaKosol Indigo-1.26.0-rc.1 (Current)
Arrow Unbalanced Equilibrium Open Half Angel Tool becomes Arrow Open Half Angel after layout Bug Priority: Medium
#2466 opened Oct 2, 2024 by AnnaKosol Indigo-1.26.0-rc.1 (Current)
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