Proper update of logging incl. test files

[astjoephysics]

Fixes #682 .

Describe your changes.
Made logging consistent with Python logger by taking logging out of sorchaArguments. Updated tests accordingly.

Review Checklist for Source Code Changes

• Does pip install still work?
• Have you written a unit test for any new functions?
• Do all the units tests run successfully?
• Does Sorcha run successfully on a test set of input files/databases?
• Have you used black on the files you have updated to confirm python programming style guide enforcement?

[codecov]

Codecov Report

Attention: 2 lines in your changes are missing coverage. Please review.

Comparison is base (0d681a8) 74.68% compared to head (fb03505) 74.80%.

Files	Patch %	Lines
src/sorcha/sorcha.py	60.00%	2 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main     #767      +/-   ##
==========================================
+ Coverage   74.68%   74.80%   +0.12%     
==========================================
  Files          66       66              
  Lines        3030     3021       -9     
==========================================
- Hits         2263     2260       -3     
+ Misses        767      761       -6     

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[mschwamb]

Looks good to be. Made a small change to put the verbosity of the log file back to what was in the original unit test