Fix ResourceWarning due to unclosed file #853
Workflow file for this run
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| name: test | |
| on: | |
| push: | |
| branches: ["main"] | |
| tags: ["*"] | |
| pull_request: | |
| branches: | |
| - "*" | |
| - "!gh-pages" | |
| schedule: | |
| - cron: "0 4 * * MON" | |
| jobs: | |
| test: | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| python-version: ["3.9", "3.10"] | |
| os: ["ubuntu-latest", "macos-latest", "windows-latest"] | |
| rdkit-version: ["2022.09", "2023.03"] | |
| # just enable python 3.11 on ubuntu to not blow up the CI time. | |
| include: | |
| - os: ubuntu-latest | |
| python-version: "3.11" | |
| rdkit-version: "2023.03" | |
| runs-on: ${{ matrix.os }} | |
| timeout-minutes: 30 | |
| defaults: | |
| run: | |
| shell: bash -l {0} | |
| name: | | |
| os=${{ matrix.os }} | |
| - python=${{ matrix.python-version }} | |
| - rdkit=${{ matrix.rdkit-version }} | |
| steps: | |
| - name: Checkout the code | |
| uses: actions/checkout@v3 | |
| - name: Setup mamba | |
| uses: mamba-org/setup-micromamba@v1 | |
| with: | |
| environment-file: env.yml | |
| environment-name: my_env | |
| cache-environment: true | |
| cache-downloads: true | |
| create-args: >- | |
| python=${{ matrix.python-version }} | |
| rdkit=${{ matrix.rdkit-version }} | |
| - name: Install library | |
| run: python -m pip install --no-deps -e . # `-e` required for correct `coverage` run. | |
| - name: Run tests | |
| run: pytest | |
| - name: Codecov Upload | |
| uses: codecov/codecov-action@v3 | |
| with: | |
| files: ./coverage.xml | |
| flags: unittests | |
| name: codecov-umbrella | |
| fail_ci_if_error: false | |
| verbose: false | |
| env_vars: ${{ matrix.os }},${{ matrix.python-version }},${{ matrix.rdkit-version }} | |
| - name: Test building the doc | |
| run: mkdocs build |