doc: minor fixes to fMRIprep singularity example

examples/fmriprep-singularity/fmriprep-singularity

@@ -15,15 +15,15 @@
 # the lists: `input.txt`, `output.txt`, and `parameter.txt` to keep the command
 # line short.
 #
-# `datalad compute -I input.txt -O output.txt -P parameter.txt fmriprep-singularity`
+# `datalad make -I input.txt -O output.txt -P parameter.txt fmriprep-singularity`
 
 inputs = ['container', 'input_dir', 'output_dir', 'participant_label', 'license_file']
 
 use_shell = 'false'
 executable = 'singularity'
 
 # Note: `{root_directory}` resolves to the directory of the dataset in which the
-# computation was started with `datalad compute`.
+# computation was started with `datalad make`.
 
 arguments = [
     'run', '{container}',

examples/fmriprep-singularity/fmriprep-singularity.md

@@ -12,9 +12,7 @@ The example comprises the following files:
 
 This example requires Singularity.
 
-Please note, that there is no need to install fMRIprep. The singularity container will be automatically retrieved from the ReproNim containers collection. However, in order to use fMRIprep you need to obtain a [FreeSurfer license](https://surfer.nmr.mgh.harvard.edu/fswiki/License). 
-
-Please also note that fMRIprep is invoked with the option `--sloppy`. This is done to reduce the runtime. For reproducible results, please run fMRIprep without the option `--sloppy`.
+Please note, that there is no need to install fMRIprep. The singularity container will be automatically retrieved from the ReproNim containers collection. However, in order to use fMRIprep you need to obtain a [FreeSurfer license](https://surfer.nmr.mgh.harvard.edu/fswiki/License).
 
 It is assumed that the license file is located in `/tmp`. Make sure to copy it there or modify the `parameter.txt` file accordingly (see the [Add template](#add-template) section below).
 
@@ -103,3 +101,7 @@ You can also do that in `debug` mode:
 ```bash
 > datalad -l debug make -I input.txt -O output.txt -P parameter.txt fmriprep-singularity
 ```
+
+### Final note
+
+In this example fMRIprep is invoked with the option `--sloppy` to reduce the runtime. For reproducible results, run fMRIprep without `--sloppy`.

examples/fmriprep-singularity/input.txt

@@ -1,4 +1,4 @@
-# Paths are relative to the dataset in which `datalad compute` was executed
+# Paths are relative to the dataset in which `datalad make` was executed
 data/ds000102/dataset_description.json
 data/ds000102/participants.tsv
 data/ds000102/T1w.json

examples/fmriprep-singularity/output.txt

@@ -1,2 +1,2 @@
-# Paths are relative to the dataset in which `datalad compute` was executed
+# Paths are relative to the dataset in which `datalad make` was executed
 derivatives/ds000102/**