What's Changed
- Multi plane caiman by @ttngu207 in #88
- Add multi-plane caiman image processing by @kushalbakshi in #99
- Bugfix - remove hardcoded
n_fields
fromprairie_view_loader.py
by @kushalbakshi in #101 - Dev memoized results by @ttngu207 in #102
- feat: handle PrairieView new multi-page tif format by @ttngu207 in #108
- Primarily fixing suite2p loader for missing ROI detection or trace extraction - pulling from staging for other minor updates by @ttngu207 in #109
- Fix(suite2p_loader): Return nan array if "VCorr" not in suite2p output by @kushalbakshi in #110
- Dev memoized results by @ttngu207 in #111
- Check for bruker-generated multi_tiff by @kushalbakshi in #107
- Update multiprocessing arguments to latest versions by @kushalbakshi in #112
- Update CaImAn utilities for compatibility with latest CaImAn by @kushalbakshi in #113
- update: deprecate "caiman_compatible" argument by @ttngu207 in #114
- fix: additional safeguard to close the file and delete the tffl object by @ttngu207 in #115
- feat: add
use_cuda
for caiman by @ttngu207 in #116 - feat: set
gb_per_file
and write multiple bigtiff by @ttngu207 in #117 - fix: incorrect dimension ordering for single-plane caimain loading by @ttngu207 in #118
- feat(run_caiman): use
output_dir
forCAIMAN_TEMP
by @ttngu207 in #119 - Add
memoized_result
+ update calcium imaging utility functions by @kushalbakshi in #121
Full Changelog: 0.6.1...0.7.0