Releases: cytoscape/py4cytoscape
Releases · cytoscape/py4cytoscape
0.0.11
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Updated documentation and tutorials
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Made set_*_property_bypass more resilient to null node/edge lists
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For Notebook support, improved startup code and added notebook_show_image(), notebook_export_show_image() functions
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For color generators, added reverse= parameter and made divergent palettes automatically reversed
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Fixed filter and style bypass functions to not crash when there are no selected nodes
0.0.9
- Updated documentation and tutorials
- Reworked iGraph support to track RCy3 implementation
- Added iGraph support for Graph, DiGraph, MultiGraph, MultiDiGraph
- Updated node/edge-to-suid functions to allow detection of multiple copies of a node/edge
- Enabled delete_duplicate_edges to ignore edge direction
- Added support for discrete and continuous value generators (as gen* functions in new style_auto_mappers module)
0.0.8
- Added parameters in CyNDEX functions to support subdomains
- Added apply= parameter in filter definition functions to support Cytoscape v3.9.0 separating apply from definition
- Added overwrite_file parameter to export functions
- Added Sandbox direct download from URL
- Added functions for import network from tabular file & get current style, etc
- Fixes that allow commands_help to work
0.0.7
0.0.6
0.0.5
0.0.4
Includes everything in 0.0.3 (defective release):
- Conform to
Cytoscape Automation API Definition <https://docs.google.com/spreadsheets/d/1XLWsKxGLqcBWLzoW2y6HyAUU2jMXaEaWw7QLn3NE5nY/edit?usp=sharing>
_ - Change CyError logger to write exceptions to stderr
- Add
Sandboxing
interface and functions - Add merge_network() and analyze_network()
- Add Jupyter-bridge, Cytoscape Automation API, py4cytoscape versions to cytoscape_version_info
- Add support for Jupyter-bridge
- Add Concepts section to documentation