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26 Open 31 Closed
26 Open 31 Closed
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Issues list

Fix order of string enrichment slides in Finding Networks
#118 opened Nov 7, 2024 by AlexanderPico
Replace app page with example of "Install" button
#117 opened Nov 7, 2024 by AlexanderPico
Add AlphaFold3 to module on sources of interaction data
#116 opened Nov 7, 2024 by AlexanderPico
Add intro slide for Yihang to "Cytoscape and Network Biology: an Introduction" enhancement
#115 opened Oct 25, 2024 by khanspers
Add sif for folks to try tuning layouts
#105 opened Sep 14, 2023 by AlexanderPico
@scootermorris
Add slide defining common network terms regarding subnetworks
#103 opened Sep 12, 2023 by AlexanderPico
@AlexanderPico
1
Add slide for Filter and Search to intermediate data-vis deck
#102 opened Sep 12, 2023 by AlexanderPico
@AlexanderPico @khanspers @scootermorris
Scripted support for WikiPathways App data visualization workflow enhancement
#100 opened May 30, 2023 by khanspers
@khanspers @yihangx
1
Update to EnrichmentMap Pipeline Tutorial enhancement
#82 opened Feb 15, 2023 by Cameron-IT
@khanspers
1
Protocol for Network Analyzer enhancement help wanted
#24 opened Nov 29, 2017 by AlexanderPico
@scootermorris
Add speaker notes to all modules enhancement
#22 opened Nov 29, 2017 by AlexanderPico
@AlexanderPico @scootermorris
New presentation and RMarkdown on using NDEx and Cytoscape in R enhancement
#21 opened Nov 29, 2017 by florian-j-auer
New clustering app protocol enhancement
#19 opened Nov 29, 2017 by AlexanderPico
2
Presentation on clustering and cluster analysis enhancement
#18 opened Nov 29, 2017 by AlexanderPico
Presentation of multilayer graphs and application to Biology enhancement
#17 opened Nov 29, 2017 by AlexanderPico
Export to RCX and Cytoscape as Protocol enhancement
#16 opened Nov 29, 2017 by AlexanderPico
Topological analysis of social network in Python (Protocol and/or Automation noteboook) enhancement
#15 opened Nov 29, 2017 by AlexanderPico
Metabolic network types (Presentation) enhancement
#14 opened Nov 29, 2017 by AlexanderPico
New presentation module: Setting up and using Cytoscape/RStudio Docker enhancement
#13 opened Nov 29, 2017 by florian-j-auer
Ageing (not growing old) protocol with Python enhancement
#12 opened Nov 29, 2017 by AlexanderPico
Build-your-own pathway/network based on GO enhancement
#11 opened Nov 29, 2017 by AlexanderPico
circRNA-miRNA-mRNA (and Proteins) interaction protocol enhancement
#10 opened Nov 29, 2017 by AlexanderPico
3
Protocol for genetic association data analysis and viz enhancement
#9 opened Nov 29, 2017 by AlexanderPico
New presentation module: NDEx enhancement
#8 opened Nov 29, 2017 by florian-j-auer
Presentation module of non-bio examples enhancement
#7 opened Nov 29, 2017 by AlexanderPico
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