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@cultivarium

Cultivarium

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  1. MicrobeMod MicrobeMod Public

    A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing

    Python 44 1

  2. GenomeSPOT GenomeSPOT Public

    Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome

    Jupyter Notebook 42 2

  3. ORI-marker-screen ORI-marker-screen Public

    Software and Data for reproducible analysis for identifying functional origins in a pooled ORI-marker screen

    Jupyter Notebook 3 1

  4. LoopDB LoopDB Public

    Forked from HaseloffLab/LoopDB

    Contains a docker implementation of LoopDesigner

    CSS

Repositories

Showing 4 of 4 repositories
  • MicrobeMod Public

    A toolkit for exploring prokaryotic methylation and base modifications in nanopore sequencing

    cultivarium/MicrobeMod’s past year of commit activity
    Python 44 MIT 1 5 0 Updated Jan 23, 2025
  • GenomeSPOT Public

    Predict oxygen, temperature, salinity, and pH preferences of bacteria and archaea from a genome

    cultivarium/GenomeSPOT’s past year of commit activity
    Jupyter Notebook 42 MIT 2 6 1 Updated Jan 2, 2025
  • ORI-marker-screen Public

    Software and Data for reproducible analysis for identifying functional origins in a pooled ORI-marker screen

    cultivarium/ORI-marker-screen’s past year of commit activity
    Jupyter Notebook 3 MIT 1 1 0 Updated Nov 26, 2024
  • LoopDB Public Forked from HaseloffLab/LoopDB

    Contains a docker implementation of LoopDesigner

    cultivarium/LoopDB’s past year of commit activity
    CSS 0 MIT 1 0 0 Updated May 4, 2022

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