Feat/add db in memory option 20240412 (#47) #306
cschusingularity.yml
on: push
Changed Singularity Recipes
3s
Matrix: build-test-containers
Annotations
7 errors and 23 warnings
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Check gffquant/profilers/feature_quantifier.py
Process completed with exit code 255.
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Check gffquant/handle_args.py
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Check gffquant/db/annotation_db.py
Process completed with exit code 255.
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Check gffquant/profilers/region_quantifier.py
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Check gffquant/__init__.py
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Check gffquant/__main__.py
Process completed with exit code 255.
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Check gffquant/bin/collate_counts.py
Process completed with exit code 255.
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Changed Singularity Recipes
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: jitterbit/get-changed-files@b17fbb00bdc0c0f63fcf166580804b4d2cdc2a42. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Changed Singularity Recipes
The following actions uses node12 which is deprecated and will be forced to run on node16: jitterbit/get-changed-files@b17fbb00bdc0c0f63fcf166580804b4d2cdc2a42. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Changed Singularity Recipes
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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Changed Singularity Recipes
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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Changed Singularity Recipes
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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Changed Singularity Recipes
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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Changed Singularity Recipes
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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Changed Singularity Recipes
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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Changed Singularity Recipes
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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Check gffquant/profilers/feature_quantifier.py
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-go@v1, actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Check gffquant/profilers/feature_quantifier.py
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-go@v1, actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Check gffquant/handle_args.py
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-go@v1, actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Check gffquant/handle_args.py
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-go@v1, actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Check gffquant/db/annotation_db.py
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-go@v1, actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Check gffquant/db/annotation_db.py
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-go@v1, actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Check gffquant/profilers/region_quantifier.py
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-go@v1, actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Check gffquant/profilers/region_quantifier.py
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-go@v1, actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Check gffquant/__init__.py
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-go@v1, actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Check gffquant/__init__.py
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-go@v1, actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Check gffquant/__main__.py
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-go@v1, actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Check gffquant/__main__.py
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-go@v1, actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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Check gffquant/bin/collate_counts.py
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/setup-go@v1, actions/checkout@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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Check gffquant/bin/collate_counts.py
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/setup-go@v1, actions/checkout@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
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