ds_prep

Contains data preparation and preprocessing scripts for the Courtois-Neuromod project.

mri
- convert
  - heuristics
- prep
  - fill_intended_for
  - deface_anat
derivatives
- init_derivative_datalad (carefully set annex.largefiles, heudiconv exclude tsv by default, but fmriprep confounds are huge)
- fmriprep
- qc
  - dashqc
  - fitlins to produce basic contrasts
stimulus
- video
  - scene_cuts
  - annotation (pliers graphs to events)
- hcptrt
  - convert eprime to "rich" tsv files
  - apply pliers on language task audio, images
- games (gym bk2 to keypresses in events.tsv)
physio
- convert_segment
- preproc
- extract
  - heart_rate
  - resp
  - ...
eyetracking
- convert/extract