fix rendering of 2024-005 #100 (clickable reference) and 2024-004 #96 …

…(wrong repo)
codecheckers · Oct 18, 2024 · 0bf11b7 · 0bf11b7
1 parent de47217
commit 0bf11b7
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Showing 20 changed files with 23 additions and 23 deletions.
diff --git a/Dockerfile b/Dockerfile
@@ -14,7 +14,7 @@ WORKDIR /register
 ENTRYPOINT [ "R" ]
 
 # set R.cache path to avoid interactive prompt
-CMD [ "-e", "options(\"R.cache.rootPath\" = \"/tmp\"); codecheck::register_render(); warnings()'" ]
+CMD [ "-e", "options(\"R.cache.rootPath\" = \"/tmp\"); codecheck::register_render(); sessionInfo(); warnings()'" ]
 
 LABEL maintainer = "Daniel Nüst <[email protected]>"
 

diff --git a/docs/codecheckers/0000-0002-1322-1553/featured.json b/docs/codecheckers/0000-0002-1322-1553/featured.json
@@ -1,7 +1,7 @@
 [
   {
     "Certificate": "2024-004",
-    "Repository Link": "https://github.com/langtonhugh/scope",
+    "Repository Link": "https://github.com/codecheckers/scope",
     "Type": "community",
     "Venue": "AUMC",
     "Report": "https://doi.org/10.5281/zenodo.13364677",

diff --git a/docs/codecheckers/0000-0002-1322-1553/register.csv b/docs/codecheckers/0000-0002-1322-1553/register.csv
@@ -1,2 +1,2 @@
 "Certificate","Repository","Type","Venue","Issue"
-"2024-004","github::langtonhugh/scope","community","AUMC",96
+"2024-004","github::codecheckers/scope","community","AUMC",96
diff --git a/docs/codecheckers/0000-0002-1322-1553/register.json b/docs/codecheckers/0000-0002-1322-1553/register.json
@@ -1,7 +1,7 @@
 [
   {
     "Certificate": "2024-004",
-    "Repository Link": "https://github.com/langtonhugh/scope",
+    "Repository Link": "https://github.com/codecheckers/scope",
     "Type": "community",
     "Venue": "AUMC",
     "Report": "https://doi.org/10.5281/zenodo.13364677",

diff --git a/docs/codecheckers/0000-0002-6446-1901/featured.json b/docs/codecheckers/0000-0002-6446-1901/featured.json
@@ -6,7 +6,7 @@
     "Venue": "codecheck",
     "Report": "https://doi.org/10.5281/zenodo.13945051",
     "Title": "Sample size estimation for task-related functional MRI studies using Bayesian updating.",
-    "Paper reference": "https://doi.org/10.31234/osf.io/cz32t (currently under review at Developmental Cognitive Neuroscience)",
+    "Paper reference": "https://doi.org/10.31234/osf.io/cz32t",
     "Check date": "2024-10-15"
   }
 ]
diff --git a/docs/codecheckers/0000-0002-6446-1901/index.html b/docs/codecheckers/0000-0002-6446-1901/index.html
@@ -195,7 +195,7 @@ <h1 class="title toc-ignore">Codechecks by Lukas Röseler (0000-0002-6446-1901)<
 <tbody>
 <tr class="odd">
 <td align="left">2024-005</td>
-<td align="left"><a href="https://doi.org/10.31234/osf.io/cz32t%20(currently%20under%20review%20at%20Developmental%20Cognitive%20Neuroscience)">Sample size estimation for task-related functional MRI studies using Bayesian updating.</a></td>
+<td align="left"><a href="https://doi.org/10.31234/osf.io/cz32t">Sample size estimation for task-related functional MRI studies using Bayesian updating.</a></td>
 <td align="left">community</td>
 <td align="left">codecheck</td>
 <td align="left"><a href="https://github.com/codecheckers/register/issues/100">100</a></td>

diff --git a/docs/codecheckers/0000-0002-6446-1901/register.json b/docs/codecheckers/0000-0002-6446-1901/register.json
@@ -6,7 +6,7 @@
     "Venue": "codecheck",
     "Report": "https://doi.org/10.5281/zenodo.13945051",
     "Title": "Sample size estimation for task-related functional MRI studies using Bayesian updating.",
-    "Paper reference": "https://doi.org/10.31234/osf.io/cz32t (currently under review at Developmental Cognitive Neuroscience)",
+    "Paper reference": "https://doi.org/10.31234/osf.io/cz32t",
     "Check date": "2024-10-15"
   }
 ]
diff --git a/docs/codecheckers/0000-0002-6446-1901/register.md b/docs/codecheckers/0000-0002-6446-1901/register.md
@@ -3,6 +3,6 @@ title: Codechecks by Lukas Röseler (0000-0002-6446-1901)
 ---
 
 
-|Certificate |Paper Title                                                                              |Type      |Venue     |Issue |Report                                  |Check date |
+|Certificate |Paper Title                                                                             |Type      |Venue     |Issue |Report                                  |Check date |
 |:-------|:---------------------------------------------|:------------------|:------------------|:---|:--------------------------|:------------------|
-|2024-005    |[Sample size estimation for task-related functional MRI studies using Bayesian updating.](https://doi.org/10.31234/osf.io/cz32t (currently under review at Developmental Cognitive Neuroscience))|community |codecheck |[100](https://github.com/codecheckers/register/issues/100)|https://doi.org/10.5281/zenodo.13945051 |2024-10-15 |
+|2024-005    |[Sample size estimation for task-related functional MRI studies using Bayesian updating.](https://doi.org/10.31234/osf.io/cz32t)|community |codecheck |[100](https://github.com/codecheckers/register/issues/100)|https://doi.org/10.5281/zenodo.13945051 |2024-10-15 |
diff --git a/docs/featured.json b/docs/featured.json
@@ -1,7 +1,7 @@
 [
   {
     "Certificate": "2024-004",
-    "Repository Link": "https://github.com/langtonhugh/scope",
+    "Repository Link": "https://github.com/codecheckers/scope",
     "Type": "community",
     "Venue": "AUMC",
     "Report": "https://doi.org/10.5281/zenodo.13364677",
@@ -96,7 +96,7 @@
     "Venue": "codecheck",
     "Report": "https://doi.org/10.5281/zenodo.13945051",
     "Title": "Sample size estimation for task-related functional MRI studies using Bayesian updating.",
-    "Paper reference": "https://doi.org/10.31234/osf.io/cz32t (currently under review at Developmental Cognitive Neuroscience)",
+    "Paper reference": "https://doi.org/10.31234/osf.io/cz32t",
     "Check date": "2024-10-15"
   }
 ]
diff --git a/docs/index.html b/docs/index.html
@@ -879,7 +879,7 @@ <h1 class="title toc-ignore">CODECHECK Register</h1>
 </tr>
 <tr class="odd">
 <td align="left">2024-005</td>
-<td align="left"><a href="https://doi.org/10.31234/osf.io/cz32t%20(currently%20under%20review%20at%20Developmental%20Cognitive%20Neuroscience)">Sample size estimation for task-related functional MRI studies using Bayesian updating.</a></td>
+<td align="left"><a href="https://doi.org/10.31234/osf.io/cz32t">Sample size estimation for task-related functional MRI studies using Bayesian updating.</a></td>
 <td align="left">community</td>
 <td align="left">codecheck</td>
 <td align="left"><a href="https://github.com/codecheckers/register/issues/100">100</a></td>

diff --git a/docs/register.json b/docs/register.json
@@ -671,7 +671,7 @@
   },
   {
     "Certificate": "2024-004",
-    "Repository Link": "https://github.com/langtonhugh/scope",
+    "Repository Link": "https://github.com/codecheckers/scope",
     "Type": "community",
     "Venue": "AUMC",
     "Report": "https://doi.org/10.5281/zenodo.13364677",
@@ -766,7 +766,7 @@
     "Venue": "codecheck",
     "Report": "https://doi.org/10.5281/zenodo.13945051",
     "Title": "Sample size estimation for task-related functional MRI studies using Bayesian updating.",
-    "Paper reference": "https://doi.org/10.31234/osf.io/cz32t (currently under review at Developmental Cognitive Neuroscience)",
+    "Paper reference": "https://doi.org/10.31234/osf.io/cz32t",
     "Check date": "2024-10-15"
   }
 ]
diff --git a/docs/register.md b/docs/register.md
@@ -81,4 +81,4 @@ title: CODECHECK Register
 |2024-011    |[Process Analysis in Humanitarian Voluntary Geographic Information: the case of the HOT Tasking Manager](https://doi.org/10.5194/agile-giss-5-5-2024)       |conference |AGILEGIS       |[69](https://github.com/codecheckers/register/issues/69)|https://doi.org/10.17605/osf.io/FMGB4   |2024-05-27 |
 |2024-012    |[The Impact of Traffic Lights on Modal Split and Route Choice: A use-case in Vienna](https://doi.org/10.5194/agile-giss-4-...)                              |conference |AGILEGIS       |[69](https://github.com/codecheckers/register/issues/69)|https://doi.org/10.17605/osf.io/W42AD   |2024-05-30 |
 |2024-013    |[Road Network Mapping from Multispectral Satellite Imagery: Leveraging Deep Learning and Spectral Bands](https://doi.org/10.5194/agile-giss-4-...)          |conference |AGILEGIS       |[69](https://github.com/codecheckers/register/issues/69)|https://doi.org/10.17605/osf.io/TXGZV   |2024-05-31 |
-|2024-005    |[Sample size estimation for task-related functional MRI studies using Bayesian updating.](https://doi.org/10.31234/osf.io/cz32t (currently under review at Developmental Cognitive Neuroscience))|community  |codecheck      |[100](https://github.com/codecheckers/register/issues/100)|https://doi.org/10.5281/zenodo.13945051 |2024-10-15 |
+|2024-005    |[Sample size estimation for task-related functional MRI studies using Bayesian updating.](https://doi.org/10.31234/osf.io/cz32t)                            |community  |codecheck      |[100](https://github.com/codecheckers/register/issues/100)|https://doi.org/10.5281/zenodo.13945051 |2024-10-15 |
diff --git a/docs/venues/communities/aumc/featured.json b/docs/venues/communities/aumc/featured.json
@@ -1,7 +1,7 @@
 [
   {
     "Certificate": "2024-004",
-    "Repository Link": "https://github.com/langtonhugh/scope",
+    "Repository Link": "https://github.com/codecheckers/scope",
     "Report": "https://doi.org/10.5281/zenodo.13364677",
     "Title": "Open Science interventions to improve reproducibility and replicability of research: a scoping review preprint",
     "Paper reference": "https://doi.org/10.31222/osf.io/a8rmu",

diff --git a/docs/venues/communities/aumc/register.csv b/docs/venues/communities/aumc/register.csv
@@ -1,2 +1,2 @@
 "Certificate","Repository","Issue"
-"2024-004","github::langtonhugh/scope",96
+"2024-004","github::codecheckers/scope",96
diff --git a/docs/venues/communities/aumc/register.json b/docs/venues/communities/aumc/register.json
@@ -1,7 +1,7 @@
 [
   {
     "Certificate": "2024-004",
-    "Repository Link": "https://github.com/langtonhugh/scope",
+    "Repository Link": "https://github.com/codecheckers/scope",
     "Report": "https://doi.org/10.5281/zenodo.13364677",
     "Title": "Open Science interventions to improve reproducibility and replicability of research: a scoping review preprint",
     "Paper reference": "https://doi.org/10.31222/osf.io/a8rmu",

diff --git a/docs/venues/communities/codecheck/featured.json b/docs/venues/communities/codecheck/featured.json
@@ -68,7 +68,7 @@
     "Repository Link": "https://github.com/codecheckers/sample-size-codecheck",
     "Report": "https://doi.org/10.5281/zenodo.13945051",
     "Title": "Sample size estimation for task-related functional MRI studies using Bayesian updating.",
-    "Paper reference": "https://doi.org/10.31234/osf.io/cz32t (currently under review at Developmental Cognitive Neuroscience)",
+    "Paper reference": "https://doi.org/10.31234/osf.io/cz32t",
     "Check date": "2024-10-15"
   }
 ]
diff --git a/docs/venues/communities/codecheck/index.html b/docs/venues/communities/codecheck/index.html
@@ -247,7 +247,7 @@ <h1 class="title toc-ignore">CODECHECK Register for community (codecheck)</h1>
 </tr>
 <tr class="odd">
 <td align="left">2024-005</td>
-<td align="left"><a href="https://doi.org/10.31234/osf.io/cz32t%20(currently%20under%20review%20at%20Developmental%20Cognitive%20Neuroscience)">Sample size estimation for task-related functional MRI studies using Bayesian updating.</a></td>
+<td align="left"><a href="https://doi.org/10.31234/osf.io/cz32t">Sample size estimation for task-related functional MRI studies using Bayesian updating.</a></td>
 <td align="left"><a href="https://github.com/codecheckers/register/issues/100">100</a></td>
 <td align="left"><a href="https://doi.org/10.5281/zenodo.13945051" class="uri">https://doi.org/10.5281/zenodo.13945051</a></td>
 <td align="left">2024-10-15</td>

diff --git a/docs/venues/communities/codecheck/register.json b/docs/venues/communities/codecheck/register.json
@@ -68,7 +68,7 @@
     "Repository Link": "https://github.com/codecheckers/sample-size-codecheck",
     "Report": "https://doi.org/10.5281/zenodo.13945051",
     "Title": "Sample size estimation for task-related functional MRI studies using Bayesian updating.",
-    "Paper reference": "https://doi.org/10.31234/osf.io/cz32t (currently under review at Developmental Cognitive Neuroscience)",
+    "Paper reference": "https://doi.org/10.31234/osf.io/cz32t",
     "Check date": "2024-10-15"
   }
 ]
diff --git a/docs/venues/communities/codecheck/register.md b/docs/venues/communities/codecheck/register.md
@@ -13,4 +13,4 @@ title: CODECHECK Register for community (codecheck)
 |2020-014    |[Patterned perturbation of inhibition can reveal the dynamical structure of neural processing ](https://doi.org/10.7554/eLife.52757)     |[21](https://github.com/codecheckers/register/issues/21)|https://doi.org/10.5281/zenodo.3967326  |2020-07-28 |
 |2020-015    |[A model for focal seizure onset, propagation, evolution, and progression ](https://doi.org/10.7554/eLife.50927)                         |[22](https://github.com/codecheckers/register/issues/22)|https://doi.org/10.5281/zenodo.3978402  |2020-08-04 |
 |2022-001    |[Geographically Weighted Regressions for prioritizing educational planning, policies, and interventions ](http://www.iiep.unesco.org/en/publication/geographically-weighted-regressions-prioritizing-educational-planning-policies-and)|[40](https://github.com/codecheckers/register/issues/40)|https://doi.org/10.5281/zenodo.6040066  |2022-01-19 |
-|2024-005    |[Sample size estimation for task-related functional MRI studies using Bayesian updating.](https://doi.org/10.31234/osf.io/cz32t (currently under review at Developmental Cognitive Neuroscience))|[100](https://github.com/codecheckers/register/issues/100)|https://doi.org/10.5281/zenodo.13945051 |2024-10-15 |
+|2024-005    |[Sample size estimation for task-related functional MRI studies using Bayesian updating.](https://doi.org/10.31234/osf.io/cz32t)         |[100](https://github.com/codecheckers/register/issues/100)|https://doi.org/10.5281/zenodo.13945051 |2024-10-15 |
diff --git a/register.csv b/register.csv
@@ -66,7 +66,7 @@ Certificate,Repository,Type,Venue,Issue
 2024-001,github::codecheckers/LazarEtAl_RSocOpenSci_2024,community,preprint,60
 2024-002,github::codecheckers/domestic.wastewater.variability,community,codecheck NL,61
 2024-003,github::codecheckers/sddtmpc,community,codecheck NL,66
-2024-004,github::langtonhugh/scope,community,AUMC,96
+2024-004,github::codecheckers/scope,community,AUMC,96
 2024-006,osf::ymc3t,conference,AGILEGIS,69
 2024-007,osf::gvpd9,conference,AGILEGIS,69
 2024-008,osf::3nbjw,conference,AGILEGIS,69