feat (CI): use micromamba #1130
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| name: Basic tests | |
| on: [push, pull_request] | |
| jobs: | |
| pre-commit: | |
| runs-on: ubuntu-latest | |
| if: github.event_name != 'push' || github.repository == 'DIRACGrid/DIRAC' | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.11' | |
| - name: Install pre-commit | |
| run: pip install pre-commit | |
| - name: Run pre-commit | |
| run: pre-commit run --all-files --show-diff-on-failure | |
| shellcheck: | |
| runs-on: ubuntu-latest | |
| if: github.event_name != 'push' || github.repository == 'DIRACGrid/DIRAC' | |
| timeout-minutes: 30 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Run shellcheck | |
| # TODO This should cover more than just tests/CI | |
| # Excluded codes related to sourcing files | |
| # SC1090: Can't follow non-constant source | |
| # SC1091: Not following sourced file | |
| run: | | |
| find tests/CI -name '*.sh' -print0 | xargs -0 -n1 shellcheck --exclude=SC1090,SC1091 --external-source | |
| pycodestyle: | |
| runs-on: ubuntu-latest | |
| if: github.event_name != 'push' || github.repository == 'DIRACGrid/DIRAC' | |
| timeout-minutes: 30 | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: actions/setup-python@v5 | |
| with: | |
| python-version: '3.11' | |
| - name: Installing dependencies | |
| run: | | |
| python -m pip install pycodestyle | |
| - name: Run pycodestyle | |
| run: | | |
| if [[ "${REFERENCE_BRANCH}" != "" ]]; then | |
| git remote add upstream https://github.com/DIRACGrid/DIRAC.git | |
| git fetch --no-tags upstream "${REFERENCE_BRANCH}" | |
| git branch -vv | |
| git diff -U0 "upstream/${REFERENCE_BRANCH}" ':(exclude)tests/formatting/pep8_bad.py' | pycodestyle --diff | |
| fi | |
| check: | |
| runs-on: ubuntu-latest | |
| if: github.event_name != 'push' || github.repository == 'DIRACGrid/DIRAC' | |
| timeout-minutes: 30 | |
| defaults: | |
| # Activate the conda environment automatically in each step | |
| run: | |
| shell: bash -l {0} | |
| strategy: | |
| fail-fast: False | |
| matrix: | |
| command: | |
| # TODO These three tests fail on Python 3: | |
| # * `test_BaseType_Unicode` and `test_nestedStructure` fail due to | |
| # DISET's string and unicode types being poorly defined | |
| - pytest --runslow -k 'not test_BaseType_Unicode and not test_nestedStructure' | |
| - pylint -j 0 -E src/ | |
| - mypy | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Fail-fast for outdated pipelines | |
| run: .github/workflows/fail-fast.sh | |
| - uses: mamba-org/setup-micromamba@v2 | |
| with: | |
| environment-file: environment.yml | |
| - name: Run tests | |
| run: | | |
| # FIXME: The unit tests currently only work with editable installs | |
| pip install -e .[server,testing] | |
| ${{ matrix.command }} | |
| env: | |
| REFERENCE_BRANCH: ${{ github['base_ref'] || github['head_ref'] }} | |
| pylint-py27: | |
| name: Pylint for Python 2.7 in Pilot files | |
| runs-on: ubuntu-latest | |
| if: github.event_name != 'push' || github.repository == 'DIRACGrid/DIRAC' | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Fail-fast for outdated pipelines | |
| run: .github/workflows/fail-fast.sh | |
| - name: prepare environment | |
| run: | | |
| conda config --set add_pip_as_python_dependency false | |
| conda create -c conda-forge -n test-env python=2.7 pylint=1.9.2 astroid=1.6.5 | |
| - name: run pilot wrapper test | |
| run: | | |
| eval "$(conda shell.bash hook)" && conda activate test-env | |
| pylint -j 0 -E \ | |
| tests/Integration/WorkloadManagementSystem/Test_GenerateAndExecutePilotWrapper.py \ | |
| src/DIRAC/WorkloadManagementSystem/Utilities/PilotWrapper.py \ | |
| src/DIRAC/Resources/Computing/BatchSystems/*.py |