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Merge branch 'master' of https://github.com/cbouy/molgrid
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cbouy committed Oct 10, 2021
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Expand Up @@ -14,11 +14,14 @@ mols2grid is an interactive chemical viewer for 2D structures of small molecules
## 🐍 Installation
---

mols2grid was developped for Python 3.6+ and requires rdkit (>=2019.09.1), pandas and jinja2 as dependencies.
mols2grid was developped for Python 3.6+ and requires rdkit (>=2020.03.1), pandas and jinja2 as dependencies.
The easiest way to install it is from conda:
```shell
conda install -c conda-forge mols2grid
```

To install mols2grid from a clean conda environment:
Alternatively, you can also use pip:
```shell
conda install -c conda-forge 'rdkit>=2019.09.1'
pip install mols2grid
```

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* save the grid with `mols2grid.save(output_path, ...)`. The file that is generated is a standalone HTML document that should work with most web browsers.
* display it directly in a Jupyter notebook with `mols2grid.display(...)` (optionnal argument: `width="100%"`, `height=None`)

## 🚀 Resources
---
* [Simple exemple](https://iwatobipen.wordpress.com/2021/06/13/draw-molecules-on-jupyter-notebook-rdkit-mols2grid/) by iwatobipen
* Creating a web app with Streamlit for filtering datasets:
* [Blog post](https://blog.reverielabs.com/building-web-applications-from-python-scripts-with-streamlit/) by Justin Chavez
* [Video tutorial](https://www.youtube.com/watch?v=0rqIwSeUImo) by Data Professor
* [Viewing clustered chemical structures](https://practicalcheminformatics.blogspot.com/2021/07/viewing-clustered-chemical-structures.html) by Pat Walters

## 👏 Acknowledgments
---
* [@fredrikw](https://github.com/fredrikw) (contributor)
* [@JustinChavez](https://github.com/JustinChavez) (contributor)
* [@hadim](https://github.com/hadim) (conda feedstock maintainer)

## ⚖ License
---
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