setup mark02 for rerun

cbg-ethz · Aug 29, 2023 · 15576f4 · 15576f4
1 parent d95ee28
commit 15576f4
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diff --git a/workflows/mark02.smk b/workflows/mark02.smk
@@ -61,7 +61,7 @@ CS_seed = 42 # <-- configure cell simulation seed here
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 # True Tree Parameters
 tree_types = ["r"] # <-- configure tree type here ["r","s","d"]
-tree_seeds = [42]#, 34] # <-- configure tree seed here
+tree_seeds = [42, 34] # <-- configure tree seed here
 
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diff --git a/workflows/tree_inference.smk b/workflows/tree_inference.smk
@@ -20,8 +20,8 @@ from pyggdrasil.tree_inference import (
 ## Relative path from DATADIR to the repo root
 
 #REPODIR = "/cluster/work/bewi/members/gkoehn/repos/PYggdrasil"
-REPODIR = ".."
-#DATADIR = "/cluster/work/bewi/members/gkoehn/data"
+#REPODIR = ".."
+DATADIR = "/cluster/work/bewi/members/gkoehn/data"
 
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