add thread control1

lollipop/cli/deconvolute.py

@@ -14,7 +14,7 @@
 import pandas as pd
 import numpy as np
 from tqdm import tqdm, trange
-from threadpoolctl import threadpool_info, ThreadpoolController
+from threadpoolctl import threadpool_info, ThreadpoolController, threadpool_limits
 
 import lollipop as ll
 
@@ -147,6 +147,11 @@ def _deconvolute_bootstrap(
     List[pd.DataFrame]
         The deconvolution results for the location and bootstrap iterations.
     """
+    print("Threadpool: ", threadpool_info())
+
+    logging.warning(threadpool_info())
+
+    controller = ThreadpoolController()
 
     # deconvolution results
     deconv = []
@@ -243,10 +248,8 @@ def _deconvolute_bootstrap(
                 confint=confint(**confint_params),
                 **weights,
             )
-
-            logging.warning(threadpool_info())
-
-            t_kdec = t_kdec.deconv_all(**deconv_params)
+            with controller.limit(limits=1, user_api='blas'):
+                t_kdec = t_kdec.deconv_all(**deconv_params)
 
             if have_confint:
                 # with conf int