Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Hope you can add permutation in this tool #8

Open
zengyr49 opened this issue Oct 9, 2019 · 0 comments
Open

Hope you can add permutation in this tool #8

zengyr49 opened this issue Oct 9, 2019 · 0 comments

Comments

@zengyr49
Copy link

zengyr49 commented Oct 9, 2019

I saw CONEXIC, another tool which imitates your tool to find out the relationship between driver genes and other genes, use both bootstrap and permutation to filter out more genes so that we can get a list of genes which contains less genes.

However, the result of your tool, as it is often the case, contains many genes that is redundant. I believe that if you provide your users with the permutation test function, the outcome of your tool will be better to explain.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant