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Questions about the minimum sample size required for the algorithm #17

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biginfor opened this issue Aug 11, 2022 · 0 comments
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@biginfor
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Dear developer:
I wonder the minimum sample size required to construct the regulatory network.I used the transcriptional profiles of tumor (9) and para-cancer samples (4) to run ARACNE AP respectively,unfortunately, both of them failed. I noticed that some people said that the minimum sample size for ARACNE is 100[https://www.biostars.org/p/154145/].But if I use 13 samples to run, I get the expected results.Is that ok?
Any help would be appreciated!

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