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Issues list

Reasons of multiple higher interaction locations in the heatmap?
#105 opened Dec 12, 2024 by hungweichen0327
Juicer post & only hi-c contact maps with no scaffolding
#102 opened Dec 5, 2024 by ShadeNiece
4
Sorted by names vs sorted by coordinates
#101 opened Dec 3, 2024 by cruzreyc
1
re-scaffolding using agp file
#100 opened Dec 2, 2024 by amara86
1
Issues with resolution
#99 opened Nov 24, 2024 by hw85241
1
Question about the mapping process for yahs
#98 opened Nov 6, 2024 by ericgonzalezs
2
Issue with Juicer Tools Preprocessing
#96 opened Oct 5, 2024 by yeyu52
1
There is no longer a need to manually set the scale factor in Juicebox
#94 opened Aug 26, 2024 by zengxiaofei
15
YAHS merges two chromosomes in alternate haplotype
#88 opened Jun 4, 2024 by MboiTui
7
Scaffolding by yahs introduces 200 bp gaps in the assembly
#87 opened Apr 23, 2024 by janina-rinke
3
Juicer files only allow manual curation of first scaffold in JBAT
#86 opened Apr 16, 2024 by Rhia15
2
Unexpected Zero Reads Pairs and Output Size with yahs and Juicer Preprocessing Pipeline
#85 opened Apr 16, 2024 by Hanjiangna
4
The question about regenerating a HiC contact map for the final assembly
#84 opened Mar 8, 2024 by qdu-beep
YAHS output is identical to the input assembly
#82 opened Feb 12, 2024 by sarjopp
3
juicer_tools pre runs for days then encounters java.lang.NullPointerException
#81 opened Jan 17, 2024 by ethan-baldwin
14
Round of yahs
#80 opened Jan 17, 2024 by DiegoSafian
1
generate hic contact map based on purged genome?
#79 opened Jan 15, 2024 by SmnYanGe
3
hic interactions statistics
#78 opened Dec 15, 2023 by AlcaArctica
3
error occurred after setting the "yahs -l" parameter
#77 opened Nov 29, 2023 by xychen233
1
two short(1000bp) contigs are generated by YaHS
#76 opened Nov 27, 2023 by spoonbender76
1
chromosome number more tnan my species
#75 opened Nov 8, 2023 by mengzhiyue-comeon
2
stack smashing detected
#73 opened Oct 26, 2023 by amvarani
1
No inter links from bed file?
#72 opened Sep 26, 2023 by sanalbert
11
Difference between v1.2 and v1.2a.1?
#71 opened Sep 15, 2023 by xiekunwhy
10
After manual correction of juicebox convert agp to fasta
#70 opened Sep 7, 2023 by ABDULLAHGUJJAR
1
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