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PairedTag_v1.8.0
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@github-actions github-actions released this 05 Nov 19:32
· 4 commits to master since this release
PairedTag_v1.8.0
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1.8.0

2024-10-23 (Date of Last Commit)

  • Updated the workflow to include a new expected_cells input parameter describing the number of cells used as input to the library preparation; this is passed to both the ATAC workflows and Optimus workflows and the default is set to 3000 cells
  • Updated the ATAC library CSV and the Gene Expression library CSV to be consistent in file naming convention and to have similar case for metric names
  • Added a new metric to the ATAC library CSV to calculate percent_target, which is the number of estimated cells by SnapATAC2 divided by expected_cells input
  • Updated the ATAC fragment file output so that it is bgzipped
  • Updated memory settings for PairedTag Utils
Assets 5
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