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Adding docs
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PauAndrio committed Jan 17, 2025
1 parent baac088 commit d2a751c
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Showing 2 changed files with 6 additions and 2 deletions.
4 changes: 3 additions & 1 deletion biobb_morph/morph/common.py
Original file line number Diff line number Diff line change
Expand Up @@ -92,7 +92,9 @@ def morph(

# -------------------------------------------------------------------------------------------------------------------------------------------------------------------
# Morphing Process

print("\n" * 10)
print(f"{os.getcwd()}")
print("\n" * 10)
# define file name, path, disc, and patient id
pathFile = os.path.dirname(fileIn) # file directory
baseName = os.path.basename(fileIn) # file basename
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4 changes: 3 additions & 1 deletion biobb_morph/morph/morph.py
Original file line number Diff line number Diff line change
Expand Up @@ -207,7 +207,9 @@ def launch(self) -> int:
f"results zip file: {self.stage_io_dict['out']['output_morphed_zip_path']}",
self.out_log,
)
fu.zip_list(self.stage_io_dict["out"]["output_morphed_zip"], [results_path])
fu.zip_list(
self.stage_io_dict["out"]["output_morphed_zip_path"], [results_path]
)

# Copy files to host
self.copy_to_host()
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