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Added references
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gbayarri committed Mar 12, 2024
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1 change: 1 addition & 0 deletions .github/workflows/linting_and_testing.yml
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- 'LICENSE'
- 'setup.py'
- 'README.md'
- 'references.html'
- '**/docs/**'
- '**/json_schemas/**'

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78 changes: 78 additions & 0 deletions references.html
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<script type="application/ld+json">
{
"@context": "http://schema.org",
"@type": "SoftwareApplication",
"description": "DrugBank is a comprehensive online database that provides information about the molecular and pharmacological aspects of drugs.",
"name": "DrugBank",
"url": "https://go.drugbank.com/",
"applicationCategory": "Drug database",
"citation": "http://www.ncbi.nlm.nih.gov/pubmed/37953279",
"license": "other",
"softwareVersion": "6.0"
}
</script>
<script type="application/ld+json">
{
"@context": "http://schema.org",
"@type": "SoftwareApplication",
"description": "AlphaFold Protein Structure Database.",
"name": "AlphaFold",
"url": "https://alphafold.ebi.ac.uk/",
"applicationCategory": "Protein Structure Database",
"citation": "https://academic.oup.com/nar/advance-article/doi/10.1093/nar/gkab1061/6430488",
"license": "https://creativecommons.org/licenses/by/4.0/",
"softwareVersion": "2.3.2"
}
</script>
<script type="application/ld+json">
{
"@context": "http://schema.org",
"@type": "SoftwareApplication",
"description": "PDBe's REST API is a programmatic way to obtain information from the PDB. You can access details about sample, experiment, models, compounds, cross-references, publications, quality, assemblies and more.",
"name": "Protein Data Bank in Europe (PDBe)",
"url": "https://www.ebi.ac.uk/pdbe/pdbe-rest-api",
"applicationCategory": "Protein Structure Database",
"citation": "http://dx.doi.org/10.1093/nar/gkz990",
"license": "https://creativecommons.org/licenses/by/4.0/",
"softwareVersion": "1.0"
}
</script>
<script type="application/ld+json">
{
"@context": "http://schema.org",
"@type": "SoftwareApplication",
"description": "RCSB Protein Data Bank (RCSB PDB) enables breakthroughs in science and education by providing access and tools for exploration, visualization, and analysis.",
"name": "RCSB PDB",
"url": "https://www.rcsb.org/",
"applicationCategory": "Protein Structure Database",
"citation": "https://doi.org/10.1093/nar/28.1.235",
"license": "https://creativecommons.org/licenses/by/4.0/",
"softwareVersion": "3.1"
}
</script>
<script type="application/ld+json">
{
"@context": "http://schema.org",
"@type": "SoftwareApplication",
"description": "MemProtMD is a database of over 7000 intrinsic membrane protein structures identified in the Protein Data Bank, inserted into simulated lipid bilayers using Coarse-Grained Self Assembly Molecular Dynamics simulations.",
"name": "MemProtMD",
"url": "http://memprotmd.bioch.ox.ac.uk/",
"applicationCategory": "Membrane Protein Structure Database",
"citation": "http://dx.doi.org/10.1093/nar/gky1047",
"license": "https://creativecommons.org/licenses/by/4.0/",
"softwareVersion": "1.0"
}
</script>
<script type="application/ld+json">
{
"@context": "http://schema.org",
"@type": "SoftwareApplication",
"description": "UniProt is the world's leading high-quality, comprehensive and freely accessible resource of protein sequence and functional information.",
"name": "UniProt",
"url": "https://www.uniprot.org/",
"applicationCategory": "Protein Sequence Database",
"citation": "https://doi.org/10.1093/nar/gkac1052",
"license": "https://creativecommons.org/licenses/by/4.0/",
"softwareVersion": "1.0"
}
</script>

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