Merge pull request #48 from sfiligoi/comment_230822

Fix typo in usage comment
biocore · Aug 22, 2023 · ea3a620 · ea3a620
2 parents 6e835f1 + 20db3b5
commit ea3a620
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diff --git a/README.md b/README.md
@@ -173,7 +173,7 @@ The methods can be used directly through the command line after install:
                                  hdf5_fp32 : HFD5 format, using fp32 precision.
                                  hdf5_fp64 : HFD5 format, using fp64 precision.
         --subsample-depth   Depth of subsampling of the input BIOM before computing unifrac (required for mode==multi, optional for one-off)
-        --subsample-replacement	[OPTIONAL] Subsample qith or without replacement (default is with)
+        --subsample-replacement	[OPTIONAL] Subsample with or without replacement (default is with)
         --n-subsamples	[OPTIONAL] if mode==multi, number of subsampled UniFracs to compute (default: 100)
         --permanova	[OPTIONAL] Number of PERMANOVA permutations to compute (default: 999 with -g, do not compute if 0)
         --pcoa	[OPTIONAL] Number of PCoA dimensions to compute (default: 10, do not compute if 0)

diff --git a/src/su.cpp b/src/su.cpp
@@ -49,7 +49,7 @@ void usage() {
     std::cout << "    \t\t    hdf5_fp64 : HFD5 format, using fp64 precision." << std::endl;
     std::cout << "    \t\t    hdf5_nodist : HFD5 format, no distance matrix. (default if mode==multi)" << std::endl;
     std::cout << "    --subsample-depth\tDepth of subsampling of the input BIOM before computing unifrac (required for mode==multi, optional for one-off)" << std::endl;
-    std::cout << "    --subsample-replacement\t[OPTIONAL] Subsample qith or without replacement (default is with)" << std::endl;
+    std::cout << "    --subsample-replacement\t[OPTIONAL] Subsample with or without replacement (default is with)" << std::endl;
     std::cout << "    --n-subsamples\t[OPTIONAL] if mode==multi, number of subsampled UniFracs to compute (default: 100)" << std::endl;
     std::cout << "    --permanova\t[OPTIONAL] Number of PERMANOVA permutations to compute (default: 999 with -g, do not compute if 0)" << std::endl;
     std::cout << "    --pcoa\t[OPTIONAL] Number of PCoA dimensions to compute (default: 10, do not compute if 0)" << std::endl;