Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Update tutorials no gitpod #425

Merged
merged 4 commits into from
Dec 12, 2023
Merged

Update tutorials no gitpod #425

Show file tree
Hide file tree
Changes from all commits
Commits
Show all changes
4 commits
Select commit Hold shift + click to select a range
cd25ba7
removed gitpod reference from tutorials README
TimothyStiles Dec 12, 2023
295be17
fixed typo.
TimothyStiles Dec 12, 2023
dd5075b
fixed typo in 001_input_output_test.go
TimothyStiles Dec 12, 2023
baaf9c1
removed mention of gitpod.
TimothyStiles Dec 12, 2023
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
2 changes: 1 addition & 1 deletion tutorials/000_introduction_test.go
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@ real, live, running examples that you can modify and play with. Heck, it may
be the first "book" on computational synthetic biology period as far as I know.

It feels strange for me to be the first author to write this sort of thing for
a field that's already been around for 20 ~years but here I am.
a field that's already been around for ~20 years but here I am.

When I first entered the field there wasn't anything even close to resembling
a software framework for engineering organisms and even today Poly (the library
Expand Down
4 changes: 2 additions & 2 deletions tutorials/001_input_output_test.go
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -25,7 +25,7 @@ The bane of the bioinformatician's existence are the blasted file formats that
have been foisted upon us by our predecessors. Most are hard to understand and
even harder to parse programmatically.

My least favorite is the most common format for annotated sequence. The Genbank
My least favorite is the most common format for annotated sequences. The Genbank
format.

Made by some secret council of jerks in the deserts of New Mexico sometime in
Expand All @@ -40,7 +40,7 @@ I've written about many times in many other places.

Point is. To start you're going to need to get data in and out of your computer
and Poly makes it easy. Follow along below and run each test through the
included debugger via gitpod if you really want to know what's going on.
included debugger via VScode if you really want to know what's going on.

TTFN,
Tim
Expand Down
2 changes: 1 addition & 1 deletion tutorials/README.md
View file
Open in desktop
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
# Poly Tutorials

This directory holds a set of always up to date tutorials for Poly that be run can run, edited, and explored in the browser via this [gitpod deployment](https://gitpod.io/#tutorial=true/https://github.com/bebop/poly)
This directory holds a set of always up to date tutorials for Poly that be run can run, edited, and explored as tests in VScode or your favorite editor/debugger.

Many tutorials in this directory haven't been started yet. Please feel free to write one and add it to our main repo via pull request!
Loading