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athowes/README.md

Hi! I'm Adam, a Bayesian statistician primarily working with the Center for Forecasting and Outbreak Analytics at the CDC.

To give an idea about my work see the following:
Repository   Description
epidist An R package for estimating delay distributions accounting for censoring and truncation
helios An R package for simulating the impact of far UVC interventions using an individual-based model
thesis My thesis "Bayesian spatio-temporal methods for small-area estimation of HIV indicators"
beyond-borders Evaluating the suitability of spatial adjacency for small-area estimation (arealutils)
multi-agyw Estimating HIV risk group proportions with a multinomial spatio-temporal model (multi.utils, UNAIDS)
naomi-aghq Improving approximate Bayesian inference methods for extended latent Gaussian models (inf.utils)
exp-growth Time-series methods for disease-agnostic metagenomic environmental threat detection

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  1. epinowcast/epidist epinowcast/epidist Public

    Estimate epidemiological delay distributions with brms

    R 13 5

  2. thesis thesis Public

    Bayesian spatio-temporal methods for small-area estimation of HIV indicators (PhD, Imperial College London, 2023)

    TeX 14 1

  3. beyond-borders beyond-borders Public

    Evaluating the suitability of spatial adjacency for small-area estimation

    R 2 1

  4. multi-agyw multi-agyw Public

    Spatio-temporal estimates of HIV risk group proportions for AGYW across 13 priority countries in sub-Saharan Africa

    R 3 2

  5. naomi-aghq naomi-aghq Public

    Fast approximate Bayesian inference of HIV indicators using PCA adaptive Gauss-Hermite quadrature

    R 4 1

  6. exp-growth exp-growth Public

    Time-series methods for disease-agnostic metagenomic environmental threat detection

    R 4