Automated Tests for Galaxy on Kubernetes Stacks

Galaxy on GKE deployed via GalaxyKubeMan (AnVIL)

Deployment Testing

Twice a day, GalaxyKubeMan (GKM) is deployed on GKE, mimicking an AnVIL deployment. The purpose of these tests is to provide reasonable confidence that Galaxy is launchable on the AnVIL everyday.

Below is a plot summarizing successful deployments and GKM install times. Click here or on the image for more details.

Tool Testing

After each successful deployment, automated tool tests are also run against the instance. These serve as an end-to-end-like test for Galaxy, providing confidence that Galaxy is not only launchable but functional. These tests cycle on a weekly basis through the entire suite of tools installed by default on AnVIL, providing reasonable confidence that the tools encountered by most users remain functional, and automating the detection and reporting of tools breaking.

Latest tool tests for each chunk:

Chunk ID	Tool List	Latest report	Previous report
0	Toolset	Mon Nov 04 00:53:24 2024	Mon Oct 28 00:53:23 2024
1	Toolset	Mon Nov 04 12:53:33 2024	Mon Oct 28 12:52:40 2024
2	Toolset	Tue Nov 05 00:51:00 2024	Tue Oct 29 00:51:38 2024
3	Toolset	Tue Nov 05 12:50:16 2024	Tue Oct 29 12:53:16 2024
4	Toolset	Wed Nov 06 00:49:57 2024	Wed Oct 30 00:51:26 2024
5	Toolset	Wed Nov 06 12:52:25 2024	Wed Oct 30 12:52:11 2024
6	Toolset	Thu Oct 31 00:52:00 2024	Thu Oct 24 00:51:49 2024
7	Toolset	Thu Oct 31 12:51:48 2024	Thu Oct 24 12:52:47 2024
8	Toolset	Fri Nov 01 00:55:11 2024	Fri Oct 25 00:51:24 2024
9	Toolset	Fri Nov 01 12:51:34 2024	Fri Oct 25 12:52:01 2024
10	Toolset	Sat Nov 02 00:50:49 2024	Sat Oct 26 00:49:46 2024
11	Toolset	Sat Nov 02 12:50:27 2024	Sat Oct 26 12:50:06 2024
12	Toolset	Sun Nov 03 00:54:26 2024	Sun Oct 27 00:55:29 2024
13	Toolset	Sun Nov 03 12:48:34 2024	Sun Oct 20 12:49:56 2024